C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 13A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056978 Kif13a-201 ENSMUSG00000021375 10090 - 13:46749087-46929718 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056978 5.787±1.90 0.549±0.00 1.748±0.75 3.934±2.13 3.121±1.78 7.014±4.15 4.643±2.21 2.315±1.11 1.029±0.44 8.514±4.78 4.864±1.60 3.412±2.05 5.895±4.91 0.942±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0002 VISTA 13:46271320-46874349
CIL_0008JF CIL_0008JF_0002 VISTA 13:46271337-46874342
CIL_0008B7 CIL_0008B7_0002 VISTA 13:46332291-46935792
CIL_00081D CIL_00081D_0002 VISTA 13:46435395-47036634
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0003RN CIL_0003RN_0002 CGP 13:46679905-46929718
CIL_0003RK CIL_0003RK_0002 CGP 13:46749087-47014850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 IEA cytokinesis
GO:0003777 IEA microtubule motor activity
GO:0005524 IEA ATP binding
GO:0005813 IEA centrosome
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007018 IEA microtubule-based movement
GO:0008017 IEA microtubule binding
GO:0008333 IEA endosome to lysosome transport
GO:0010008 IEA endosome membrane
GO:0016887 IBA ATPase activity
GO:0030496 IEA midbody
GO:0032438 IEA melanosome organization
GO:0035459 IEA cargo loading into vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000101404 kif13a-201 protein_coding Danio_rerio 0 1568
ENSDART00000154223 kif13a-001 protein_coding Danio_rerio 0 1426
ENSDART00000058858 kif13bb-201 protein_coding Danio_rerio 0 627
ENST00000259711 KIF13A-001 protein_coding Homo_sapiens 0 3661
ENST00000358380 KIF13A-003 protein_coding Homo_sapiens 0 1375
ENST00000378814 KIF13A-005 protein_coding Homo_sapiens 0 5808
ENST00000378826 KIF13A-002 protein_coding Homo_sapiens 0 3633
ENST00000378843 KIF13A-004 protein_coding Homo_sapiens 0 5535
ENST00000502297 KIF13A-006 protein_coding Homo_sapiens 0 1640
ENST00000502704 KIF13A-008 protein_coding Homo_sapiens 0 270
ENST00000505588 KIF13A-010 retained_intron Homo_sapiens 3e-32 141
ENST00000506044 KIF13A-013 protein_coding Homo_sapiens 0 658
ENST00000507576 KIF13A-009 processed_transcript Homo_sapiens 0 566

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