C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137177-ENSG00000187566 CGP 9606 6:17759183-18122606
GeneTranscriptPositionBiotype
ENSG00000137177 (KIF13A)
kinesin family member 13A 		ENST00000259711 (KIF13A-001) 17763693-17987569 protein_coding
ENST00000358380 (KIF13A-003) 17770365-17817200 protein_coding
ENST00000378814 (KIF13A-005) 17759183-17987463 protein_coding
ENST00000378826 (KIF13A-002) 17763695-17987482 protein_coding
ENST00000378843 (KIF13A-004) 17763695-17987481 protein_coding
ENST00000502297 (KIF13A-006) 17759254-17794697 protein_coding
ENST00000502704 (KIF13A-008) 17950406-17987623 protein_coding
ENST00000503342 (KIF13A-011) 17812044-17817190 processed_transcript
ENST00000505588 (KIF13A-010) 17873263-17987077 retained_intron
ENST00000506044 (KIF13A-013) 17780760-17796790 protein_coding
ENST00000507576 (KIF13A-009) 17855477-17987551 processed_transcript
ENST00000514714 (KIF13A-012) 17785593-17795032 processed_transcript
ENSG00000187566 (NHLRC1)
NHL repeat containing E3 ubiquitin protein ligase 1 		ENST00000340650 (NHLRC1-001) 18121419-18122606 protein_coding
ENSG00000220920 (RP3-525L6.2)
 ENST00000407932 (RP3-525L6.2-001) 17953572-17953930 unprocessed_pseudogene
CIL_0003RK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021375-ENSMUSG00000044231 CGP 10090 13:46749087-47014850
GeneTranscriptPositionBiotype
ENSMUSG00000021375 (Kif13a)
kinesin family member 13A 		ENSMUST00000056978 (Kif13a-201) 46749087-46929718 protein_coding
ENSMUSG00000044231 (Nhlrc1)
NHL repeat containing 1 		ENSMUST00000052747 (Nhlrc1-201) 47012558-47014850 protein_coding
ENSMUSG00000051606 (2010001K21Rik)
RIKEN cDNA 2010001K21 gene 		ENSMUST00000060680 (2010001K21Rik-201) 47010673-47011195 pseudogene
ENSMUSG00000064558 (Gm24620)
predicted gene, 24620 		ENSMUST00000082624 (Gm24620-201) 46767520-46767649 snoRNA
ENSMUSG00000084466 (Gm22960)
predicted gene, 22960 		ENSMUST00000122517 (Gm22960-201) 46902589-46902692 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RK_0001ENSG00000137177ENST00000259711ENST00000358380ENST00000378814ENST00000378826ENST00000378843ENST00000502297ENST00000502704ENST00000503342ENST00000505588ENST00000506044ENST00000507576ENST00000514714ENSG00000187566ENST00000340650ENSG00000220920ENST00000407932CIL_0003RK_0002ENSMUSG00000021375ENSMUST00000056978ENSMUSG00000044231ENSMUST00000052747ENSMUSG00000051606ENSMUST00000060680ENSMUSG00000064558ENSMUST00000082624ENSMUSG00000084466ENSMUST00000122517
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RK_0001ENSG00000137177ENST00000259711ENST00000378814ENST00000378826ENST00000378843ENST00000502297ENSG00000187566ENST00000340650ENSG00000220920ENST00000407932CIL_0003RK_0002ENSMUSG00000021375ENSMUST00000056978ENSMUSG00000044231ENSMUST00000052747ENSMUSG00000051606ENSMUST00000060680ENSMUSG00000064558ENSMUST00000082624ENSMUSG00000084466ENSMUST00000122517
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137177 ENST00000259711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.287±0.00 N/A
ENST00000358380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378814 7.916±0.00 N/A N/A 2.626±1.67 2.341±0.00 4.061±3.13 N/A 2.877±0.00 0.465±0.00 2.323±1.25 N/A 3.319±1.99 N/A 5.340±0.00
ENST00000378826 N/A 1.713±0.00 N/A 1.058±0.00 1.155±0.00 N/A N/A 0.890±0.00 0.763±0.00 1.554±0.00 N/A 1.025±0.00 0.462±0.00 N/A
ENST00000378843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00
ENST00000502297 N/A 2.706±0.00 N/A N/A 6.889±0.00 4.902±0.00 N/A 1.547±0.00 2.075±0.00 3.582±0.00 2.757±0.00 3.444±0.05 1.390±0.01 5.677±0.00
ENST00000502704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187566 ENST00000340650 0.292±0.00 0.704±0.00 N/A 1.414±0.88 1.111±0.92 0.201±0.14 0.228±0.19 0.494±0.00 0.918±0.35 0.184±0.12 2.241±0.00 1.478±0.00 0.694±0.06 0.637±0.07
ENSG00000220920 ENST00000407932 0.163±0.00 0.164±0.00 1.929±0.00 0.178±0.00 0.614±0.53 N/A 0.198±0.00 1.342±0.00 N/A 0.674±0.00 N/A 1.001±0.92 N/A 0.038±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021375 ENSMUST00000056978 5.787±1.90 0.549±0.00 1.748±0.75 3.934±2.13 3.121±1.78 7.014±4.15 4.643±2.21 2.315±1.11 1.029±0.44 8.514±4.78 4.864±1.60 3.412±2.05 5.895±4.91 0.942±0.39
ENSMUSG00000044231 ENSMUST00000052747 1.766±0.28 6.555±1.13 2.276±0.43 3.215±0.89 1.932±0.34 4.086±0.32 3.172±0.32 1.290±0.18 0.788±0.49 3.622±0.68 2.704±0.29 5.313±2.71 0.191±0.09 0.336±0.17
ENSMUSG00000051606 ENSMUST00000060680 0.386±0.16 0.157±0.08 0.385±0.00 0.390±0.00 0.409±0.26 3.524±0.97 N/A 0.202±0.12 0.080±0.02 2.059±0.28 0.178±0.01 4.041±1.30 0.266±0.31 1.289±0.68
ENSMUSG00000064558 ENSMUST00000082624 N/A N/A N/A 18.817±0.00 N/A N/A N/A N/A N/A N/A 3.611±0.00 27.916±10.34 N/A N/A
ENSMUSG00000084466 ENSMUST00000122517 N/A N/A N/A N/A N/A N/A N/A N/A 144.425±0.00 N/A N/A N/A N/A N/A

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