C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocase of inner mitochondrial membrane 10B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058333 Timm10b-002 ENSMUSG00000089847 10090 + 7:105640448-105641843 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000058333
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000058333 56.847±10.01 85.906±2.71 57.885±15.04 26.175±6.15 49.370±6.27 41.563±14.67 58.708±11.32 41.528±0.00 57.004±6.52 32.764±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A8 CIL_0004A8_0002 CGP 7:105604463-105640416
CIL_0004HY CIL_0004HY_0002 CGP 7:105634203-105655748
CIL_0004HZ CIL_0004HZ_0002 CGP 7:105640056-105721799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0015031 IEA protein transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254616 TIMM10B-001 protein_coding Homo_sapiens 0 407
ENST00000464330 TIMM10B-002 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000472836 TIMM10B-001 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000528908 TIMM10B-004 retained_intron Homo_sapiens 0 374
ENST00000530751 TIMM10B-005 protein_coding Homo_sapiens 0 220
ENST00000531462 TIMM10B-007 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000533379 TIMM10B-006 nonsense_mediated_decay Homo_sapiens 0 407

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