C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocase of inner mitochondrial membrane 10 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254616 TIMM10B-001 ENSG00000132286 9606 + 11:6481447-6484679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254616
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254616 2.400±0.00 14.044±0.00 10.766±2.45 13.009±4.10 7.886±2.59 3.459±1.50 12.446±0.00 7.852±3.89 9.107±0.41 1.608±0.00 12.810±4.01 10.175±2.64 13.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A8 CIL_0004A8_0001 CGP 11:6448613-6481479
CIL_0004HY CIL_0004HY_0001 CGP 11:6474683-6484679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005743 IDA mitochondrial inner membrane
GO:0005758 TAS mitochondrial intermembrane space
GO:0006626 TAS protein targeting to mitochondrion
GO:0007160 TAS cell-matrix adhesion
GO:0042719 IDA mitochondrial intermembrane space protein transporter complex
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106783 Timm10b-001 protein_coding Mus_musculus 0 414
ENSMUST00000106780 Timm10b-004 protein_coding Mus_musculus 0 407
ENSMUST00000058333 Timm10b-002 protein_coding Mus_musculus 0 407
ENSMUST00000142874 Dnhd1-003 processed_transcript Mus_musculus 0 407
ENSMUST00000142363 Dnhd1-002 processed_transcript Mus_musculus 0 407
ENSMUST00000140385 Timm10b-013 retained_intron Mus_musculus 0 381
ENSMUST00000106785 Timm10b-007 protein_coding Mus_musculus 0 379
ENSMUST00000106786 Timm10b-010 protein_coding Mus_musculus 0 377
ENSMUST00000150479 Timm10b-003 nonsense_mediated_decay Mus_musculus 0 344
ENSMUST00000106784 Timm10b-012 protein_coding Mus_musculus 0 246
ENSMUST00000151193 Timm10b-009 retained_intron Mus_musculus 0 231
ENSMUST00000140577 Timm10b-011 processed_transcript Mus_musculus 0 224
ENSMUST00000149819 Timm10b-008 nonsense_mediated_decay Mus_musculus 0 220

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