C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000265264-ENSG00000179532 CGP 9606 11:6481485-6593758
GeneTranscriptPositionBiotype
ENSG00000132286 (TIMM10B)
translocase of inner mitochondrial membrane 10 homolog B (yeast) 		ENST00000254616 (TIMM10B-001) 6481447-6484679 protein_coding
ENST00000528908 (TIMM10B-004) 6481501-6482285 retained_intron
ENST00000530751 (TIMM10B-005) 6481501-6482798 protein_coding
ENST00000531462 (TIMM10B-007) 6481506-6483060 nonsense_mediated_decay
ENST00000533379 (TIMM10B-006) 6481508-6483058 nonsense_mediated_decay
ENSG00000179532 (DNHD1)
dynein heavy chain domain 1 		ENST00000254579 (DNHD1-201) 6497296-6572022 protein_coding
ENST00000354685 (DNHD1-001) 6497301-6520860 protein_coding
ENST00000472080 (DNHD1-003) 6508213-6520858 retained_intron
ENST00000473019 (DNHD1-002) 6497260-6504200 retained_intron
ENST00000477562 (DNHD1-005) 6497305-6498689 processed_transcript
ENST00000496802 (DNHD1-004) 6497296-6498232 protein_coding
ENST00000524401 (DNHD1-020) 6558054-6564018 nonsense_mediated_decay
ENST00000525080 (DNHD1-024) 6566607-6567352 protein_coding
ENST00000525883 (DNHD1-013) 6564749-6572027 retained_intron
ENST00000526027 (DNHD1-019) 6558934-6564019 retained_intron
ENST00000527143 (DNHD1-022) 6568705-6571814 protein_coding
ENST00000527990 (DNHD1-007) 6498216-6572022 protein_coding
ENST00000529821 (DNHD1-012) 6564077-6572022 retained_intron
ENST00000530197 (DNHD1-014) 6566105-6572019 retained_intron
ENST00000531903 (DNHD1-018) 6558054-6563317 retained_intron
ENST00000532027 (DNHD1-008) 6533924-6549035 nonsense_mediated_decay
ENST00000532467 (DNHD1-016) 6567349-6572027 retained_intron
ENST00000533635 (DNHD1-015) 6564437-6572027 retained_intron
ENST00000533649 (DNHD1-011) 6546043-6549037 retained_intron
ENST00000534210 (DNHD1-009) 6528977-6593758 retained_intron
ENSG00000254595 (CTD-2010I16.1)
 ENST00000524809 (CTD-2010I16.1-001) 6488186-6489377 processed_pseudogene
CIL_0004HZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000089847-ENSMUSG00000030882 CGP 10090 7:105640056-105721799
GeneTranscriptPositionBiotype
ENSMUSG00000030881 (Arfip2)
ADP-ribosylation factor interacting protein 2 		ENSMUST00000033171 (Arfip2-004) 105635621-105640314 nonsense_mediated_decay
ENSMUST00000084782 (Arfip2-002) 105635657-105640351 protein_coding
ENSMUST00000126589 (Arfip2-007) 105637120-105637915 processed_transcript
ENSMUST00000127759 (Arfip2-008) 105638587-105640340 retained_intron
ENSMUST00000127853 (Arfip2-006) 105635624-105637902 processed_transcript
ENSMUST00000131446 (Arfip2-001) 105634203-105640416 protein_coding
ENSMUST00000133519 (Arfip2-010) 105637188-105640308 protein_coding
ENSMUST00000134613 (Arfip2-011) 105636902-105638045 processed_transcript
ENSMUST00000137931 (Arfip2-003) 105635656-105640337 nonsense_mediated_decay
ENSMUST00000142173 (Arfip2-005) 105634207-105639914 retained_intron
ENSMUST00000157028 (Arfip2-009) 105637848-105640335 nonsense_mediated_decay
ENSMUSG00000081911 (Mrps36-ps2)
mitochondrial ribosomal protein S36, pseudogene 2 		ENSMUST00000118658 (Mrps36-ps2-001) 105690259-105690567 processed_pseudogene
ENSMUSG00000089847 (Timm10b)
translocase of inner mitochondrial membrane 10B 		ENSMUST00000058333 (Timm10b-002) 105640448-105641843 protein_coding
ENSMUST00000106780 (Timm10b-004) 105640571-105643632 protein_coding
ENSMUST00000106783 (Timm10b-001) 105640056-105643637 protein_coding
ENSMUST00000106784 (Timm10b-012) 105640590-105641825 protein_coding
ENSMUST00000106785 (Timm10b-007) 105640552-105651138 protein_coding
ENSMUST00000106786 (Timm10b-010) 105640570-105655748 protein_coding
ENSMUST00000140385 (Timm10b-013) 105640671-105641284 retained_intron
ENSMUST00000140577 (Timm10b-011) 105640589-105641749 processed_transcript
ENSMUST00000149819 (Timm10b-008) 105640564-105651679 nonsense_mediated_decay
ENSMUST00000150479 (Timm10b-003) 105640567-105641839 nonsense_mediated_decay
ENSMUST00000151193 (Timm10b-009) 105640564-105641785 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HZ_0001ENSG00000132286ENST00000254616ENST00000528908ENST00000530751ENST00000531462ENST00000533379ENSG00000179532ENST00000254579ENST00000354685ENST00000472080ENST00000473019ENST00000477562ENST00000496802ENST00000524401ENST00000525080ENST00000525883ENST00000526027ENST00000527143ENST00000527990ENST00000529821ENST00000530197ENST00000531903ENST00000532027ENST00000532467ENST00000533635ENST00000533649ENST00000534210ENSG00000254595ENST00000524809CIL_0004HZ_0002ENSMUSG00000030881ENSMUST00000033171ENSMUST00000084782ENSMUST00000126589ENSMUST00000127759ENSMUST00000127853ENSMUST00000131446ENSMUST00000133519ENSMUST00000134613ENSMUST00000137931ENSMUST00000142173ENSMUST00000157028ENSMUSG00000081911ENSMUST00000118658ENSMUSG00000089847ENSMUST00000058333ENSMUST00000106780ENSMUST00000106783ENSMUST00000106784ENSMUST00000106785ENSMUST00000106786ENSMUST00000140385ENSMUST00000140577ENSMUST00000149819ENSMUST00000150479ENSMUST00000151193
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HZ_0001ENSG00000132286ENST00000254616ENSG00000179532ENST00000254579ENST00000527990ENSG00000254595ENST00000524809CIL_0004HZ_0002ENSMUSG00000030881ENSMUST00000033171ENSMUST00000084782ENSMUST00000127853ENSMUST00000131446ENSMUST00000134613ENSMUST00000137931ENSMUST00000142173ENSMUST00000157028ENSMUSG00000081911ENSMUST00000118658ENSMUSG00000089847ENSMUST00000058333ENSMUST00000106780ENSMUST00000106783ENSMUST00000106785ENSMUST00000106786
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132286 ENST00000254616 2.400±0.00 14.044±0.00 N/A 10.766±2.45 13.009±4.10 7.886±2.59 3.459±1.50 12.446±0.00 7.852±3.89 9.107±0.41 1.608±0.00 12.810±4.01 10.175±2.64 13.157±0.00
ENST00000528908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179532 ENST00000254579 N/A 2.651±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.943±0.00
ENST00000354685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527990 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.594±0.00 N/A N/A N/A 9.602±0.00
ENST00000529821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254595 ENST00000524809 0.500±0.00 1.401±0.00 N/A N/A 0.239±0.00 0.216±0.00 0.259±0.00 0.402±0.00 0.131±0.02 0.799±0.00 N/A 0.999±0.75 0.183±0.08 0.372±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030881 ENSMUST00000033171 N/A N/A N/A N/A N/A 17.826±0.00 N/A 12.507±1.88 N/A N/A N/A 23.245±0.07 18.937±2.13 N/A
ENSMUST00000084782 22.839±3.92 N/A 27.576±8.63 27.741±3.92 17.672±0.00 28.425±2.94 8.443±1.17 22.616±3.78 11.423±1.13 23.847±0.99 10.044±3.81 29.995±6.34 18.537±0.18 N/A
ENSMUST00000126589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127853 30.938±5.15 N/A 28.538±5.23 N/A 20.189±1.59 N/A 7.280±0.00 N/A N/A 31.094±0.00 8.918±0.00 N/A N/A N/A
ENSMUST00000131446 N/A N/A 11.688±0.00 12.450±0.00 N/A N/A N/A N/A 5.755±0.00 N/A 5.968±0.00 6.802±0.82 5.119±1.07 N/A
ENSMUST00000133519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134613 N/A N/A N/A 81.185±0.00 N/A N/A N/A N/A N/A N/A N/A 69.866±0.00 51.594±0.00 N/A
ENSMUST00000137931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.923±0.00 16.831±1.90 N/A
ENSMUST00000142173 N/A N/A N/A N/A 5.964±0.00 N/A N/A N/A N/A N/A N/A 5.104±0.43 3.451±0.00 N/A
ENSMUST00000157028 N/A N/A N/A 51.315±0.00 N/A N/A N/A N/A N/A N/A N/A 45.283±0.00 47.568±7.82 N/A
ENSMUSG00000081911 ENSMUST00000118658 0.271±0.00 N/A 0.151±0.09 1.165±0.00 0.303±0.04 0.438±0.00 0.313±0.14 0.435±0.02 0.093±0.04 0.324±0.00 N/A 0.855±0.12 0.244±0.14 0.872±0.41
ENSMUSG00000089847 ENSMUST00000058333 56.847±10.01 N/A N/A N/A 85.906±2.71 57.885±15.04 26.175±6.15 49.370±6.27 41.563±14.67 58.708±11.32 41.528±0.00 57.004±6.52 32.764±0.27 N/A
ENSMUST00000106780 N/A 111.202±37.70 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106783 N/A N/A N/A N/A 3.950±0.00 19.335±0.86 N/A N/A 5.453±0.00 N/A 2.761±0.00 16.059±0.00 N/A N/A
ENSMUST00000106784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106785 206.214±3.07 282.150±56.34 N/A N/A 291.704±77.12 267.736±69.94 84.947±35.72 147.132±31.37 134.931±36.42 220.914±51.61 N/A 252.553±39.30 N/A N/A
ENSMUST00000106786 N/A 179.757±29.56 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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