C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058550 Ccni-001 ENSMUSG00000063015 10090 - 5:93181933-93206495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058550
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058550 70.138±11.54 24.319±11.36 39.568±6.34 56.736±12.32 65.297±21.28 80.686±27.39 36.115±6.11 68.029±11.43 32.134±9.18 57.218±10.38 16.807±1.06 42.006±10.23 17.881±5.62 76.690±31.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0002 VISTA 5:92697267-93298294
CIL_0008OK CIL_0008OK_0002 VISTA 5:92831077-93435726
CIL_00069X CIL_00069X_0002 CGP 5:93093457-93206495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016538 ISS cyclin-dependent protein serine/threonine kinase regulator activity
GO:0045859 ISS regulation of protein kinase activity
GO:0051726 TAS regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237654 CCNI-001 protein_coding Homo_sapiens 0 2182
ENST00000504697 CCNI-009 processed_transcript Homo_sapiens 0 361
ENST00000505609 CCNI-003 protein_coding Homo_sapiens 0 608
ENST00000506614 CCNI-007 retained_intron Homo_sapiens 0 555
ENST00000507788 CCNI-004 protein_coding Homo_sapiens 0 473
ENST00000511943 CCNI-005 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000513774 CCNI-002 protein_coding Homo_sapiens 0 405
ENST00000515468 CCNI-008 protein_coding Homo_sapiens 0 614
ENST00000515790 CCNI-006 retained_intron Homo_sapiens 0 379

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