C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 152
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058688 Rnf152-001 ENSMUSG00000047496 10090 - 1:105276914-105356670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000058688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000058688 0.204±0.03 0.544±0.28 0.271±0.00 1.852±0.56 0.321±0.11 1.531±0.74 0.281±0.09 2.509±0.93 0.917±0.58 0.376±0.11 0.136±0.00 1.274±0.77 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0002 CGP 1:104768529-105356710
CIL_0007FF CIL_0007FF_0002 CGP 1:105276914-105663677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005764 ISS lysosome
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312828 RNF152-001 protein_coding Homo_sapiens 0 1050
ENST00000397754 RNF152P1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000591306 RNF152-004 protein_coding Homo_sapiens 0 503

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