C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 152
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312828 RNF152-001 ENSG00000176641 9606 - 18:61808063-61893759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryENST00000312828
Transcript ID Brain Lung Ovary
ENST00000312828 0.517±0.00 0.803±0.00 0.521±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0001 CGP 18:61333582-61894247
CIL_0007FF CIL_0007FF_0001 CGP 18:61808063-62187118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005764 IDA lysosome
GO:0006915 TAS apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058688 Rnf152-001 protein_coding Mus_musculus 0 1050
ENSMUST00000172299 Rnf152-201 protein_coding Mus_musculus 0 952
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.000000002 71
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.000000002 71
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000008 66
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000001 62

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