Notice (8): Undefined index: CIL_0007P5_0001 [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0001',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113861204',
		'seq_end' => '113861604',
		'region_length' => '400',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0001',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113861204',
		'seq_end' => '113861604',
		'region_length' => '400',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
MARCKS		UCNEbase	9606	6:113861204-113861604
Gene		Transcript	Position	Biotype

Notice (8): Undefined index: CIL_0007P5_0002 [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0002',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113861604',
		'seq_end' => '113861983',
		'region_length' => '379',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0002',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113861604',
		'seq_end' => '113861983',
		'region_length' => '379',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
MARCKS		UCNEbase	9606	6:113861604-113861983
Gene		Transcript	Position	Biotype

Notice (8): Undefined index: CIL_0007P5_0003 [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0003',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113861984',
		'seq_end' => '113862415',
		'region_length' => '431',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0003',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113861984',
		'seq_end' => '113862415',
		'region_length' => '431',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
MARCKS		UCNEbase	9606	6:113861984-113862415
Gene		Transcript	Position	Biotype

Notice (8): Undefined index: CIL_0007P5_0005 [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0005',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113863843',
		'seq_end' => '113865068',
		'region_length' => '1225',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
$gene_el = array(
	'ENST00000612661' => array(
		'Adipose' => array(
			'average_FPKM' => '26.876',
			'stddev_FPKM' => '0.00'
		),
		'Adrenal' => array(
			'average_FPKM' => '33.001',
			'stddev_FPKM' => '0.00'
		),
		'Bladder' => array(
			'average_FPKM' => '4.107',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '25.060',
			'stddev_FPKM' => '4.99'
		),
		'Breast' => array(
			'average_FPKM' => '17.879',
			'stddev_FPKM' => '15.00'
		),
		'Colon' => array(
			'average_FPKM' => '24.288',
			'stddev_FPKM' => '3.09'
		),
		'Heart' => array(
			'average_FPKM' => '4.216',
			'stddev_FPKM' => '0.59'
		),
		'Kidney' => array(
			'average_FPKM' => '3.975',
			'stddev_FPKM' => '0.57'
		),
		'Liver' => array(
			'average_FPKM' => '8.625',
			'stddev_FPKM' => '5.80'
		),
		'Lung' => array(
			'average_FPKM' => '24.952',
			'stddev_FPKM' => '7.26'
		),
		'Muscle' => array(
			'average_FPKM' => '1.795',
			'stddev_FPKM' => '1.36'
		),
		'Ovary' => array(
			'average_FPKM' => '24.464',
			'stddev_FPKM' => '4.15'
		),
		'Placenta' => array(
			'average_FPKM' => '31.039',
			'stddev_FPKM' => '5.04'
		),
		'Testis' => array(
			'average_FPKM' => '11.618',
			'stddev_FPKM' => '9.98'
		)
	),
	'ENST00000617290' => array(
		'Bladder' => array(
			'average_FPKM' => '12.884',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '13.932',
			'stddev_FPKM' => '0.00'
		),
		'Breast' => array(
			'average_FPKM' => '12.026',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '38.943',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '4.920',
			'stddev_FPKM' => '0.05'
		),
		'Kidney' => array(
			'average_FPKM' => '4.830',
			'stddev_FPKM' => '0.00'
		),
		'Liver' => array(
			'average_FPKM' => '14.237',
			'stddev_FPKM' => '12.11'
		),
		'Lung' => array(
			'average_FPKM' => '25.293',
			'stddev_FPKM' => '11.00'
		),
		'Muscle' => array(
			'average_FPKM' => '3.199',
			'stddev_FPKM' => '0.56'
		),
		'Ovary' => array(
			'average_FPKM' => '24.615',
			'stddev_FPKM' => '3.67'
		),
		'Placenta' => array(
			'average_FPKM' => '23.712',
			'stddev_FPKM' => '5.02'
		)
	)
)
$gene_key = 'ENSG00000277443'
$is_first = false
$tran_el = array(
	'Bladder' => array(
		'average_FPKM' => '12.884',
		'stddev_FPKM' => '0.00'
	),
	'Brain' => array(
		'average_FPKM' => '13.932',
		'stddev_FPKM' => '0.00'
	),
	'Breast' => array(
		'average_FPKM' => '12.026',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '38.943',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '4.920',
		'stddev_FPKM' => '0.05'
	),
	'Kidney' => array(
		'average_FPKM' => '4.830',
		'stddev_FPKM' => '0.00'
	),
	'Liver' => array(
		'average_FPKM' => '14.237',
		'stddev_FPKM' => '12.11'
	),
	'Lung' => array(
		'average_FPKM' => '25.293',
		'stddev_FPKM' => '11.00'
	),
	'Muscle' => array(
		'average_FPKM' => '3.199',
		'stddev_FPKM' => '0.56'
	),
	'Ovary' => array(
		'average_FPKM' => '24.615',
		'stddev_FPKM' => '3.67'
	),
	'Placenta' => array(
		'average_FPKM' => '23.712',
		'stddev_FPKM' => '5.02'
	)
)
$tran_key = 'ENST00000617290'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0005',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113863843',
		'seq_end' => '113865068',
		'region_length' => '1225',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
$gene_el = array(
	'ENST00000612661' => array(
		'Adipose' => array(
			'average_FPKM' => '26.876',
			'stddev_FPKM' => '0.00'
		),
		'Adrenal' => array(
			'average_FPKM' => '33.001',
			'stddev_FPKM' => '0.00'
		),
		'Bladder' => array(
			'average_FPKM' => '4.107',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '25.060',
			'stddev_FPKM' => '4.99'
		),
		'Breast' => array(
			'average_FPKM' => '17.879',
			'stddev_FPKM' => '15.00'
		),
		'Colon' => array(
			'average_FPKM' => '24.288',
			'stddev_FPKM' => '3.09'
		),
		'Heart' => array(
			'average_FPKM' => '4.216',
			'stddev_FPKM' => '0.59'
		),
		'Kidney' => array(
			'average_FPKM' => '3.975',
			'stddev_FPKM' => '0.57'
		),
		'Liver' => array(
			'average_FPKM' => '8.625',
			'stddev_FPKM' => '5.80'
		),
		'Lung' => array(
			'average_FPKM' => '24.952',
			'stddev_FPKM' => '7.26'
		),
		'Muscle' => array(
			'average_FPKM' => '1.795',
			'stddev_FPKM' => '1.36'
		),
		'Ovary' => array(
			'average_FPKM' => '24.464',
			'stddev_FPKM' => '4.15'
		),
		'Placenta' => array(
			'average_FPKM' => '31.039',
			'stddev_FPKM' => '5.04'
		),
		'Testis' => array(
			'average_FPKM' => '11.618',
			'stddev_FPKM' => '9.98'
		)
	),
	'ENST00000617290' => array(
		'Bladder' => array(
			'average_FPKM' => '12.884',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '13.932',
			'stddev_FPKM' => '0.00'
		),
		'Breast' => array(
			'average_FPKM' => '12.026',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '38.943',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '4.920',
			'stddev_FPKM' => '0.05'
		),
		'Kidney' => array(
			'average_FPKM' => '4.830',
			'stddev_FPKM' => '0.00'
		),
		'Liver' => array(
			'average_FPKM' => '14.237',
			'stddev_FPKM' => '12.11'
		),
		'Lung' => array(
			'average_FPKM' => '25.293',
			'stddev_FPKM' => '11.00'
		),
		'Muscle' => array(
			'average_FPKM' => '3.199',
			'stddev_FPKM' => '0.56'
		),
		'Ovary' => array(
			'average_FPKM' => '24.615',
			'stddev_FPKM' => '3.67'
		),
		'Placenta' => array(
			'average_FPKM' => '23.712',
			'stddev_FPKM' => '5.02'
		)
	)
)
$gene_key = 'ENSG00000277443'
$is_first = false
$tran_el = array(
	'Bladder' => array(
		'average_FPKM' => '12.884',
		'stddev_FPKM' => '0.00'
	),
	'Brain' => array(
		'average_FPKM' => '13.932',
		'stddev_FPKM' => '0.00'
	),
	'Breast' => array(
		'average_FPKM' => '12.026',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '38.943',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '4.920',
		'stddev_FPKM' => '0.05'
	),
	'Kidney' => array(
		'average_FPKM' => '4.830',
		'stddev_FPKM' => '0.00'
	),
	'Liver' => array(
		'average_FPKM' => '14.237',
		'stddev_FPKM' => '12.11'
	),
	'Lung' => array(
		'average_FPKM' => '25.293',
		'stddev_FPKM' => '11.00'
	),
	'Muscle' => array(
		'average_FPKM' => '3.199',
		'stddev_FPKM' => '0.56'
	),
	'Ovary' => array(
		'average_FPKM' => '24.615',
		'stddev_FPKM' => '3.67'
	),
	'Placenta' => array(
		'average_FPKM' => '23.712',
		'stddev_FPKM' => '5.02'
	)
)
$tran_key = 'ENST00000617290'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
MARCKS		UCNEbase	9606	6:113863843-113865068
Gene		Transcript	Position	Biotype

Notice (8): Undefined index: CIL_0007P5_0006 [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0006',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113865072',
		'seq_end' => '113867176',
		'region_length' => '2104',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
$gene_el = array(
	'ENST00000612661' => array(
		'Adipose' => array(
			'average_FPKM' => '26.876',
			'stddev_FPKM' => '0.00'
		),
		'Adrenal' => array(
			'average_FPKM' => '33.001',
			'stddev_FPKM' => '0.00'
		),
		'Bladder' => array(
			'average_FPKM' => '4.107',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '25.060',
			'stddev_FPKM' => '4.99'
		),
		'Breast' => array(
			'average_FPKM' => '17.879',
			'stddev_FPKM' => '15.00'
		),
		'Colon' => array(
			'average_FPKM' => '24.288',
			'stddev_FPKM' => '3.09'
		),
		'Heart' => array(
			'average_FPKM' => '4.216',
			'stddev_FPKM' => '0.59'
		),
		'Kidney' => array(
			'average_FPKM' => '3.975',
			'stddev_FPKM' => '0.57'
		),
		'Liver' => array(
			'average_FPKM' => '8.625',
			'stddev_FPKM' => '5.80'
		),
		'Lung' => array(
			'average_FPKM' => '24.952',
			'stddev_FPKM' => '7.26'
		),
		'Muscle' => array(
			'average_FPKM' => '1.795',
			'stddev_FPKM' => '1.36'
		),
		'Ovary' => array(
			'average_FPKM' => '24.464',
			'stddev_FPKM' => '4.15'
		),
		'Placenta' => array(
			'average_FPKM' => '31.039',
			'stddev_FPKM' => '5.04'
		),
		'Testis' => array(
			'average_FPKM' => '11.618',
			'stddev_FPKM' => '9.98'
		)
	),
	'ENST00000617290' => array(
		'Bladder' => array(
			'average_FPKM' => '12.884',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '13.932',
			'stddev_FPKM' => '0.00'
		),
		'Breast' => array(
			'average_FPKM' => '12.026',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '38.943',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '4.920',
			'stddev_FPKM' => '0.05'
		),
		'Kidney' => array(
			'average_FPKM' => '4.830',
			'stddev_FPKM' => '0.00'
		),
		'Liver' => array(
			'average_FPKM' => '14.237',
			'stddev_FPKM' => '12.11'
		),
		'Lung' => array(
			'average_FPKM' => '25.293',
			'stddev_FPKM' => '11.00'
		),
		'Muscle' => array(
			'average_FPKM' => '3.199',
			'stddev_FPKM' => '0.56'
		),
		'Ovary' => array(
			'average_FPKM' => '24.615',
			'stddev_FPKM' => '3.67'
		),
		'Placenta' => array(
			'average_FPKM' => '23.712',
			'stddev_FPKM' => '5.02'
		)
	)
)
$gene_key = 'ENSG00000277443'
$is_first = false
$tran_el = array(
	'Bladder' => array(
		'average_FPKM' => '12.884',
		'stddev_FPKM' => '0.00'
	),
	'Brain' => array(
		'average_FPKM' => '13.932',
		'stddev_FPKM' => '0.00'
	),
	'Breast' => array(
		'average_FPKM' => '12.026',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '38.943',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '4.920',
		'stddev_FPKM' => '0.05'
	),
	'Kidney' => array(
		'average_FPKM' => '4.830',
		'stddev_FPKM' => '0.00'
	),
	'Liver' => array(
		'average_FPKM' => '14.237',
		'stddev_FPKM' => '12.11'
	),
	'Lung' => array(
		'average_FPKM' => '25.293',
		'stddev_FPKM' => '11.00'
	),
	'Muscle' => array(
		'average_FPKM' => '3.199',
		'stddev_FPKM' => '0.56'
	),
	'Ovary' => array(
		'average_FPKM' => '24.615',
		'stddev_FPKM' => '3.67'
	),
	'Placenta' => array(
		'average_FPKM' => '23.712',
		'stddev_FPKM' => '5.02'
	)
)
$tran_key = 'ENST00000617290'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0006',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113865072',
		'seq_end' => '113867176',
		'region_length' => '2104',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
$gene_el = array(
	'ENST00000612661' => array(
		'Adipose' => array(
			'average_FPKM' => '26.876',
			'stddev_FPKM' => '0.00'
		),
		'Adrenal' => array(
			'average_FPKM' => '33.001',
			'stddev_FPKM' => '0.00'
		),
		'Bladder' => array(
			'average_FPKM' => '4.107',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '25.060',
			'stddev_FPKM' => '4.99'
		),
		'Breast' => array(
			'average_FPKM' => '17.879',
			'stddev_FPKM' => '15.00'
		),
		'Colon' => array(
			'average_FPKM' => '24.288',
			'stddev_FPKM' => '3.09'
		),
		'Heart' => array(
			'average_FPKM' => '4.216',
			'stddev_FPKM' => '0.59'
		),
		'Kidney' => array(
			'average_FPKM' => '3.975',
			'stddev_FPKM' => '0.57'
		),
		'Liver' => array(
			'average_FPKM' => '8.625',
			'stddev_FPKM' => '5.80'
		),
		'Lung' => array(
			'average_FPKM' => '24.952',
			'stddev_FPKM' => '7.26'
		),
		'Muscle' => array(
			'average_FPKM' => '1.795',
			'stddev_FPKM' => '1.36'
		),
		'Ovary' => array(
			'average_FPKM' => '24.464',
			'stddev_FPKM' => '4.15'
		),
		'Placenta' => array(
			'average_FPKM' => '31.039',
			'stddev_FPKM' => '5.04'
		),
		'Testis' => array(
			'average_FPKM' => '11.618',
			'stddev_FPKM' => '9.98'
		)
	),
	'ENST00000617290' => array(
		'Bladder' => array(
			'average_FPKM' => '12.884',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '13.932',
			'stddev_FPKM' => '0.00'
		),
		'Breast' => array(
			'average_FPKM' => '12.026',
			'stddev_FPKM' => '0.00'
		),
		'Colon' => array(
			'average_FPKM' => '38.943',
			'stddev_FPKM' => '0.00'
		),
		'Heart' => array(
			'average_FPKM' => '4.920',
			'stddev_FPKM' => '0.05'
		),
		'Kidney' => array(
			'average_FPKM' => '4.830',
			'stddev_FPKM' => '0.00'
		),
		'Liver' => array(
			'average_FPKM' => '14.237',
			'stddev_FPKM' => '12.11'
		),
		'Lung' => array(
			'average_FPKM' => '25.293',
			'stddev_FPKM' => '11.00'
		),
		'Muscle' => array(
			'average_FPKM' => '3.199',
			'stddev_FPKM' => '0.56'
		),
		'Ovary' => array(
			'average_FPKM' => '24.615',
			'stddev_FPKM' => '3.67'
		),
		'Placenta' => array(
			'average_FPKM' => '23.712',
			'stddev_FPKM' => '5.02'
		)
	)
)
$gene_key = 'ENSG00000277443'
$is_first = false
$tran_el = array(
	'Bladder' => array(
		'average_FPKM' => '12.884',
		'stddev_FPKM' => '0.00'
	),
	'Brain' => array(
		'average_FPKM' => '13.932',
		'stddev_FPKM' => '0.00'
	),
	'Breast' => array(
		'average_FPKM' => '12.026',
		'stddev_FPKM' => '0.00'
	),
	'Colon' => array(
		'average_FPKM' => '38.943',
		'stddev_FPKM' => '0.00'
	),
	'Heart' => array(
		'average_FPKM' => '4.920',
		'stddev_FPKM' => '0.05'
	),
	'Kidney' => array(
		'average_FPKM' => '4.830',
		'stddev_FPKM' => '0.00'
	),
	'Liver' => array(
		'average_FPKM' => '14.237',
		'stddev_FPKM' => '12.11'
	),
	'Lung' => array(
		'average_FPKM' => '25.293',
		'stddev_FPKM' => '11.00'
	),
	'Muscle' => array(
		'average_FPKM' => '3.199',
		'stddev_FPKM' => '0.56'
	),
	'Ovary' => array(
		'average_FPKM' => '24.615',
		'stddev_FPKM' => '3.67'
	),
	'Placenta' => array(
		'average_FPKM' => '23.712',
		'stddev_FPKM' => '5.02'
	)
)
$tran_key = 'ENST00000617290'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
MARCKS		UCNEbase	9606	6:113865072-113867176
Gene		Transcript	Position	Biotype

Notice (8): Undefined index: CIL_0007P5_0008 [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0008',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113884878',
		'seq_end' => '113887000',
		'region_length' => '2122',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
$gene_el = array(
	'ENST00000434296' => array(
		'Adipose' => array(
			'average_FPKM' => '0.018',
			'stddev_FPKM' => '0.00'
		),
		'Adrenal' => array(
			'average_FPKM' => '0.344',
			'stddev_FPKM' => '0.00'
		),
		'Bladder' => array(
			'average_FPKM' => '0.063',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '0.175',
			'stddev_FPKM' => '0.02'
		),
		'Breast' => array(
			'average_FPKM' => '0.073',
			'stddev_FPKM' => '0.04'
		),
		'Colon' => array(
			'average_FPKM' => '0.288',
			'stddev_FPKM' => '0.22'
		),
		'Heart' => array(
			'average_FPKM' => '0.016',
			'stddev_FPKM' => '0.01'
		),
		'Kidney' => array(
			'average_FPKM' => '0.223',
			'stddev_FPKM' => '0.05'
		),
		'Liver' => array(
			'average_FPKM' => '0.279',
			'stddev_FPKM' => '0.02'
		),
		'Lung' => array(
			'average_FPKM' => '0.467',
			'stddev_FPKM' => '0.06'
		),
		'Ovary' => array(
			'average_FPKM' => '0.225',
			'stddev_FPKM' => '0.13'
		),
		'Placenta' => array(
			'average_FPKM' => '0.128',
			'stddev_FPKM' => '0.05'
		),
		'Testis' => array(
			'average_FPKM' => '0.044',
			'stddev_FPKM' => '0.01'
		)
	)
)
$gene_key = 'ENSG00000227502'
$is_first = false
$tran_el = array(
	'Adipose' => array(
		'average_FPKM' => '0.018',
		'stddev_FPKM' => '0.00'
	),
	'Adrenal' => array(
		'average_FPKM' => '0.344',
		'stddev_FPKM' => '0.00'
	),
	'Bladder' => array(
		'average_FPKM' => '0.063',
		'stddev_FPKM' => '0.00'
	),
	'Brain' => array(
		'average_FPKM' => '0.175',
		'stddev_FPKM' => '0.02'
	),
	'Breast' => array(
		'average_FPKM' => '0.073',
		'stddev_FPKM' => '0.04'
	),
	'Colon' => array(
		'average_FPKM' => '0.288',
		'stddev_FPKM' => '0.22'
	),
	'Heart' => array(
		'average_FPKM' => '0.016',
		'stddev_FPKM' => '0.01'
	),
	'Kidney' => array(
		'average_FPKM' => '0.223',
		'stddev_FPKM' => '0.05'
	),
	'Liver' => array(
		'average_FPKM' => '0.279',
		'stddev_FPKM' => '0.02'
	),
	'Lung' => array(
		'average_FPKM' => '0.467',
		'stddev_FPKM' => '0.06'
	),
	'Ovary' => array(
		'average_FPKM' => '0.225',
		'stddev_FPKM' => '0.13'
	),
	'Placenta' => array(
		'average_FPKM' => '0.128',
		'stddev_FPKM' => '0.05'
	),
	'Testis' => array(
		'average_FPKM' => '0.044',
		'stddev_FPKM' => '0.01'
	)
)
$tran_key = 'ENST00000434296'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Code Context

        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
		'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
		'ENSG00000175967' => 'uncharacterized FLJ34503',
		'ENSG00000196591' => 'histone deacetylase 2',
		'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
		'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
		'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
		'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
		'ENSG00000221599' => null,
		'ENSG00000228624' => null,
		'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000019777' => 'histone deacetylase 2',
		'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
		'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
		'ENSMUSG00000088423' => 'predicted gene, 22554'
	),
	'gene_name_arr' => array(
		'ENSG00000277443' => 'MARCKS',
		'ENSG00000227502' => 'LINC01268',
		'ENSG00000175967' => 'FLJ34503',
		'ENSG00000196591' => 'HDAC2',
		'ENSG00000212333' => 'RNA5SP213',
		'ENSG00000216471' => 'RPSAP43',
		'ENSG00000216723' => 'NUDT19P3',
		'ENSG00000218089' => 'DNAJA1P4',
		'ENSG00000221599' => 'AL136446.1',
		'ENSG00000228624' => 'RP3-399L15.3',
		'ENSG00000249853' => 'HS3ST5',
		'ENSMUSG00000019777' => 'Hdac2',
		'ENSMUSG00000044499' => 'Hs3st5',
		'ENSMUSG00000069662' => 'Marcks',
		'ENSMUSG00000088423' => 'Gm22554'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 2 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 3 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 4 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 5 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 6 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 7 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 8 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 9 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 10 => 'Adrenal',
		(int) 19 => 'Bladder',
		(int) 29 => 'Brain',
		(int) 46 => 'Breast',
		(int) 62 => 'Colon',
		(int) 79 => 'Heart',
		(int) 92 => 'Kidney',
		(int) 106 => 'Liver',
		(int) 120 => 'Lung',
		(int) 133 => 'Muscle',
		(int) 143 => 'Ovary',
		(int) 162 => 'Placenta',
		(int) 173 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 58,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000612661' => array(
			'start' => '113857362',
			'end' => '113863471',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-001'
		),
		'ENST00000617290' => array(
			'start' => '113857438',
			'end' => '113861146',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'MARCKS-201'
		),
		'ENST00000434296' => array(
			'start' => '113868013',
			'end' => '113873351',
			'transcript_biotype' => 'lincRNA',
			'transcript_name' => 'LINC01268-001'
		),
		'ENST00000314481' => array(
			'start' => '113904138',
			'end' => '113921642',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'FLJ34503-001'
		),
		'ENST00000368632' => array(
			'start' => '113940718',
			'end' => '113971157',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-003'
		),
		'ENST00000425835' => array(
			'start' => '113955927',
			'end' => '113970878',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-002'
		),
		'ENST00000518690' => array(
			'start' => '113956674',
			'end' => '113970729',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-006'
		),
		'ENST00000518756' => array(
			'start' => '113953400',
			'end' => '113957286',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-016'
		),
		'ENST00000519065' => array(
			'start' => '113933028',
			'end' => '113971285',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-001'
		),
		'ENST00000519108' => array(
			'start' => '113940718',
			'end' => '113970724',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-004'
		),
		'ENST00000520170' => array(
			'start' => '113959610',
			'end' => '113971137',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-013'
		),
		'ENST00000520746' => array(
			'start' => '113945380',
			'end' => '113949323',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-017'
		),
		'ENST00000520895' => array(
			'start' => '113958662',
			'end' => '113971126',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-010'
		),
		'ENST00000521163' => array(
			'start' => '113956670',
			'end' => '113971137',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-015'
		),
		'ENST00000521233' => array(
			'start' => '113958427',
			'end' => '113971136',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-014'
		),
		'ENST00000521610' => array(
			'start' => '113956119',
			'end' => '113970495',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-008'
		),
		'ENST00000522371' => array(
			'start' => '113956629',
			'end' => '114011308',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-012'
		),
		'ENST00000523240' => array(
			'start' => '113956690',
			'end' => '113970710',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-007'
		),
		'ENST00000523334' => array(
			'start' => '113940718',
			'end' => '113956602',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'HDAC2-005'
		),
		'ENST00000523628' => array(
			'start' => '113956110',
			'end' => '113968530',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-011'
		),
		'ENST00000524334' => array(
			'start' => '113958684',
			'end' => '113971139',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HDAC2-009'
		),
		'ENST00000391031' => array(
			'start' => '114220681',
			'end' => '114220786',
			'transcript_biotype' => 'rRNA',
			'transcript_name' => 'RNA5SP213-201'
		),
		'ENST00000402237' => array(
			'start' => '114084168',
			'end' => '114084792',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'RPSAP43-001'
		),
		'ENST00000404698' => array(
			'start' => '114019621',
			'end' => '114020483',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'NUDT19P3-001'
		),
		'ENST00000406473' => array(
			'start' => '114349483',
			'end' => '114350648',
			'transcript_biotype' => 'processed_pseudogene',
			'transcript_name' => 'DNAJA1P4-001'
		),
		'ENST00000408672' => array(
			'start' => '114277385',
			'end' => '114277478',
			'transcript_biotype' => 'miRNA',
			'transcript_name' => 'AL136446.1-201'
		),
		'ENST00000421891' => array(
			'start' => '113995144',
			'end' => '113999798',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-010'
		),
		'ENST00000431399' => array(
			'start' => '114112386',
			'end' => '114132303',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-007'
		),
		'ENST00000436876' => array(
			'start' => '113970106',
			'end' => '113995644',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-014'
		),
		'ENST00000449620' => array(
			'start' => '113970235',
			'end' => '113995802',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-015'
		),
		'ENST00000451415' => array(
			'start' => '114230141',
			'end' => '114239199',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-005'
		),
		'ENST00000517965' => array(
			'start' => '114448960',
			'end' => '114456634',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-002'
		),
		'ENST00000518470' => array(
			'start' => '114281812',
			'end' => '114468574',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-003'
		),
		'ENST00000519104' => array(
			'start' => '113969701',
			'end' => '114340738',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-004'
		),
		'ENST00000519270' => array(
			'start' => '113995975',
			'end' => '114059788',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-009'
		),
		'ENST00000519629' => array(
			'start' => '113995244',
			'end' => '113995915',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-017'
		),
		'ENST00000520034' => array(
			'start' => '114084569',
			'end' => '114143918',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-008'
		),
		'ENST00000520554' => array(
			'start' => '113969954',
			'end' => '113993463',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-013'
		),
		'ENST00000520891' => array(
			'start' => '113971496',
			'end' => '113995815',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-012'
		),
		'ENST00000521888' => array(
			'start' => '113971495',
			'end' => '113993356',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-016'
		),
		'ENST00000522697' => array(
			'start' => '114425612',
			'end' => '114471705',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-001'
		),
		'ENST00000522844' => array(
			'start' => '113971518',
			'end' => '113995869',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-011'
		),
		'ENST00000523087' => array(
			'start' => '113995955',
			'end' => '114235716',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-006'
		),
		'ENST00000606947' => array(
			'start' => '114231348',
			'end' => '114251919',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'RP3-399L15.3-018'
		),
		'ENST00000312719' => array(
			'start' => '114055586',
			'end' => '114343045',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-001'
		),
		'ENST00000411826' => array(
			'start' => '114055586',
			'end' => '114062877',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'HS3ST5-201'
		),
		'ENST00000441954' => array(
			'start' => '114167477',
			'end' => '114168450',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'HS3ST5-002'
		),
		'ENSMUST00000019911' => array(
			'start' => '36974544',
			'end' => '37001889',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-001'
		),
		'ENSMUST00000105510' => array(
			'start' => '36974570',
			'end' => '36996111',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hdac2-002'
		),
		'ENSMUST00000123010' => array(
			'start' => '36998172',
			'end' => '37001611',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hdac2-004'
		),
		'ENSMUST00000128031' => array(
			'start' => '36991766',
			'end' => '37001888',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hdac2-003'
		),
		'ENSMUST00000058738' => array(
			'start' => '36506819',
			'end' => '36834389',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-001'
		),
		'ENSMUST00000167191' => array(
			'start' => '36506814',
			'end' => '36833773',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-002'
		),
		'ENSMUST00000168572' => array(
			'start' => '36507026',
			'end' => '36834397',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Hs3st5-004'
		),
		'ENSMUST00000171521' => array(
			'start' => '36507407',
			'end' => '36810038',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Hs3st5-005'
		),
		'ENSMUST00000172357' => array(
			'start' => '36506889',
			'end' => '36702949',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Hs3st5-003'
		),
		'ENSMUST00000092584' => array(
			'start' => '37133375',
			'end' => '37138920',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Marcks-001'
		),
		'ENSMUST00000157798' => array(
			'start' => '36775785',
			'end' => '36775931',
			'transcript_biotype' => 'snoRNA',
			'transcript_name' => 'Gm22554-201'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_0007P5_0004' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0007' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_0009' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		),
		'CIL_0007P5_000A' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000277443' => 'myristoylated alanine-rich protein kinase C substrate',
	'ENSG00000227502' => 'long intergenic non-protein coding RNA 1268',
	'ENSG00000175967' => 'uncharacterized FLJ34503',
	'ENSG00000196591' => 'histone deacetylase 2',
	'ENSG00000212333' => 'RNA, 5S ribosomal pseudogene 213',
	'ENSG00000216471' => 'ribosomal protein SA pseudogene 43',
	'ENSG00000216723' => 'nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 3',
	'ENSG00000218089' => 'DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4',
	'ENSG00000221599' => null,
	'ENSG00000228624' => null,
	'ENSG00000249853' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000019777' => 'histone deacetylase 2',
	'ENSMUSG00000044499' => 'heparan sulfate (glucosamine) 3-O-sulfotransferase 5',
	'ENSMUSG00000069662' => 'myristoylated alanine rich protein kinase C substrate',
	'ENSMUSG00000088423' => 'predicted gene, 22554'
)
$gene_name_arr = array(
	'ENSG00000277443' => 'MARCKS',
	'ENSG00000227502' => 'LINC01268',
	'ENSG00000175967' => 'FLJ34503',
	'ENSG00000196591' => 'HDAC2',
	'ENSG00000212333' => 'RNA5SP213',
	'ENSG00000216471' => 'RPSAP43',
	'ENSG00000216723' => 'NUDT19P3',
	'ENSG00000218089' => 'DNAJA1P4',
	'ENSG00000221599' => 'AL136446.1',
	'ENSG00000228624' => 'RP3-399L15.3',
	'ENSG00000249853' => 'HS3ST5',
	'ENSMUSG00000019777' => 'Hdac2',
	'ENSMUSG00000044499' => 'Hs3st5',
	'ENSMUSG00000069662' => 'Marcks',
	'ENSMUSG00000088423' => 'Gm22554'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0001',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861204',
			'seq_end' => '113861604',
			'region_length' => '400',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0002',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861604',
			'seq_end' => '113861983',
			'region_length' => '379',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 2 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0003',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113861984',
			'seq_end' => '113862415',
			'region_length' => '431',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 3 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0004',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113862417',
			'seq_end' => '113863825',
			'region_length' => '1408',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 4 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0005',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113863843',
			'seq_end' => '113865068',
			'region_length' => '1225',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 5 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0006',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113865072',
			'seq_end' => '113867176',
			'region_length' => '2104',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 6 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0007',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113867176',
			'seq_end' => '113884878',
			'region_length' => '17702',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 7 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0008',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113884878',
			'seq_end' => '113887000',
			'region_length' => '2122',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 8 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_0009',
			'tax_id' => '9606',
			'chromosome' => '6',
			'seq_start' => '113887002',
			'seq_end' => '114451190',
			'region_length' => '564188',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	),
	(int) 9 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_0007P5_000A',
			'tax_id' => '10090',
			'chromosome' => '10',
			'seq_start' => '36379394',
			'seq_end' => '37135425',
			'region_length' => '756031',
			'region_type' => 'UCNEbase',
			'el_id' => 'MARCKS'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 10 => 'Adrenal',
	(int) 19 => 'Bladder',
	(int) 29 => 'Brain',
	(int) 46 => 'Breast',
	(int) 62 => 'Colon',
	(int) 79 => 'Heart',
	(int) 92 => 'Kidney',
	(int) 106 => 'Liver',
	(int) 120 => 'Lung',
	(int) 133 => 'Muscle',
	(int) 143 => 'Ovary',
	(int) 162 => 'Placenta',
	(int) 173 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 58
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000612661' => array(
		'start' => '113857362',
		'end' => '113863471',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-001'
	),
	'ENST00000617290' => array(
		'start' => '113857438',
		'end' => '113861146',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'MARCKS-201'
	),
	'ENST00000434296' => array(
		'start' => '113868013',
		'end' => '113873351',
		'transcript_biotype' => 'lincRNA',
		'transcript_name' => 'LINC01268-001'
	),
	'ENST00000314481' => array(
		'start' => '113904138',
		'end' => '113921642',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'FLJ34503-001'
	),
	'ENST00000368632' => array(
		'start' => '113940718',
		'end' => '113971157',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-003'
	),
	'ENST00000425835' => array(
		'start' => '113955927',
		'end' => '113970878',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-002'
	),
	'ENST00000518690' => array(
		'start' => '113956674',
		'end' => '113970729',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-006'
	),
	'ENST00000518756' => array(
		'start' => '113953400',
		'end' => '113957286',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-016'
	),
	'ENST00000519065' => array(
		'start' => '113933028',
		'end' => '113971285',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-001'
	),
	'ENST00000519108' => array(
		'start' => '113940718',
		'end' => '113970724',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-004'
	),
	'ENST00000520170' => array(
		'start' => '113959610',
		'end' => '113971137',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-013'
	),
	'ENST00000520746' => array(
		'start' => '113945380',
		'end' => '113949323',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-017'
	),
	'ENST00000520895' => array(
		'start' => '113958662',
		'end' => '113971126',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-010'
	),
	'ENST00000521163' => array(
		'start' => '113956670',
		'end' => '113971137',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-015'
	),
	'ENST00000521233' => array(
		'start' => '113958427',
		'end' => '113971136',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-014'
	),
	'ENST00000521610' => array(
		'start' => '113956119',
		'end' => '113970495',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-008'
	),
	'ENST00000522371' => array(
		'start' => '113956629',
		'end' => '114011308',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-012'
	),
	'ENST00000523240' => array(
		'start' => '113956690',
		'end' => '113970710',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-007'
	),
	'ENST00000523334' => array(
		'start' => '113940718',
		'end' => '113956602',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'HDAC2-005'
	),
	'ENST00000523628' => array(
		'start' => '113956110',
		'end' => '113968530',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-011'
	),
	'ENST00000524334' => array(
		'start' => '113958684',
		'end' => '113971139',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HDAC2-009'
	),
	'ENST00000391031' => array(
		'start' => '114220681',
		'end' => '114220786',
		'transcript_biotype' => 'rRNA',
		'transcript_name' => 'RNA5SP213-201'
	),
	'ENST00000402237' => array(
		'start' => '114084168',
		'end' => '114084792',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'RPSAP43-001'
	),
	'ENST00000404698' => array(
		'start' => '114019621',
		'end' => '114020483',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'NUDT19P3-001'
	),
	'ENST00000406473' => array(
		'start' => '114349483',
		'end' => '114350648',
		'transcript_biotype' => 'processed_pseudogene',
		'transcript_name' => 'DNAJA1P4-001'
	),
	'ENST00000408672' => array(
		'start' => '114277385',
		'end' => '114277478',
		'transcript_biotype' => 'miRNA',
		'transcript_name' => 'AL136446.1-201'
	),
	'ENST00000421891' => array(
		'start' => '113995144',
		'end' => '113999798',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-010'
	),
	'ENST00000431399' => array(
		'start' => '114112386',
		'end' => '114132303',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-007'
	),
	'ENST00000436876' => array(
		'start' => '113970106',
		'end' => '113995644',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-014'
	),
	'ENST00000449620' => array(
		'start' => '113970235',
		'end' => '113995802',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-015'
	),
	'ENST00000451415' => array(
		'start' => '114230141',
		'end' => '114239199',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-005'
	),
	'ENST00000517965' => array(
		'start' => '114448960',
		'end' => '114456634',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-002'
	),
	'ENST00000518470' => array(
		'start' => '114281812',
		'end' => '114468574',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-003'
	),
	'ENST00000519104' => array(
		'start' => '113969701',
		'end' => '114340738',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-004'
	),
	'ENST00000519270' => array(
		'start' => '113995975',
		'end' => '114059788',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-009'
	),
	'ENST00000519629' => array(
		'start' => '113995244',
		'end' => '113995915',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-017'
	),
	'ENST00000520034' => array(
		'start' => '114084569',
		'end' => '114143918',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-008'
	),
	'ENST00000520554' => array(
		'start' => '113969954',
		'end' => '113993463',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-013'
	),
	'ENST00000520891' => array(
		'start' => '113971496',
		'end' => '113995815',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-012'
	),
	'ENST00000521888' => array(
		'start' => '113971495',
		'end' => '113993356',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-016'
	),
	'ENST00000522697' => array(
		'start' => '114425612',
		'end' => '114471705',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-001'
	),
	'ENST00000522844' => array(
		'start' => '113971518',
		'end' => '113995869',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-011'
	),
	'ENST00000523087' => array(
		'start' => '113995955',
		'end' => '114235716',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-006'
	),
	'ENST00000606947' => array(
		'start' => '114231348',
		'end' => '114251919',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'RP3-399L15.3-018'
	),
	'ENST00000312719' => array(
		'start' => '114055586',
		'end' => '114343045',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-001'
	),
	'ENST00000411826' => array(
		'start' => '114055586',
		'end' => '114062877',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'HS3ST5-201'
	),
	'ENST00000441954' => array(
		'start' => '114167477',
		'end' => '114168450',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'HS3ST5-002'
	),
	'ENSMUST00000019911' => array(
		'start' => '36974544',
		'end' => '37001889',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-001'
	),
	'ENSMUST00000105510' => array(
		'start' => '36974570',
		'end' => '36996111',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hdac2-002'
	),
	'ENSMUST00000123010' => array(
		'start' => '36998172',
		'end' => '37001611',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hdac2-004'
	),
	'ENSMUST00000128031' => array(
		'start' => '36991766',
		'end' => '37001888',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hdac2-003'
	),
	'ENSMUST00000058738' => array(
		'start' => '36506819',
		'end' => '36834389',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-001'
	),
	'ENSMUST00000167191' => array(
		'start' => '36506814',
		'end' => '36833773',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-002'
	),
	'ENSMUST00000168572' => array(
		'start' => '36507026',
		'end' => '36834397',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Hs3st5-004'
	),
	'ENSMUST00000171521' => array(
		'start' => '36507407',
		'end' => '36810038',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Hs3st5-005'
	),
	'ENSMUST00000172357' => array(
		'start' => '36506889',
		'end' => '36702949',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Hs3st5-003'
	),
	'ENSMUST00000092584' => array(
		'start' => '37133375',
		'end' => '37138920',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Marcks-001'
	),
	'ENSMUST00000157798' => array(
		'start' => '36775785',
		'end' => '36775931',
		'transcript_biotype' => 'snoRNA',
		'transcript_name' => 'Gm22554-201'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_0007P5_0004' => array(
		'genes_in_region' => array(
			'ENSG00000277443' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Bladder',
			(int) 15 => 'Brain',
			(int) 16 => 'Breast',
			(int) 17 => 'Colon',
			(int) 18 => 'Heart',
			(int) 19 => 'Kidney',
			(int) 20 => 'Liver',
			(int) 21 => 'Lung',
			(int) 22 => 'Muscle',
			(int) 23 => 'Ovary',
			(int) 24 => 'Placenta'
		)
	),
	'CIL_0007P5_0007' => array(
		'genes_in_region' => array(
			'ENSG00000227502' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Ovary',
			(int) 11 => 'Placenta',
			(int) 12 => 'Testis'
		)
	),
	'CIL_0007P5_0009' => array(
		'genes_in_region' => array(
			'ENSG00000175967' => array(
				[maximum depth reached]
			),
			'ENSG00000196591' => array(
				[maximum depth reached]
			),
			'ENSG00000216723' => array(
				[maximum depth reached]
			),
			'ENSG00000218089' => array(
				[maximum depth reached]
			),
			'ENSG00000249853' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adrenal',
			(int) 1 => 'Brain',
			(int) 2 => 'Breast',
			(int) 3 => 'Colon',
			(int) 4 => 'Heart',
			(int) 5 => 'Liver',
			(int) 6 => 'Lung',
			(int) 7 => 'Ovary',
			(int) 8 => 'Placenta',
			(int) 9 => 'Testis',
			(int) 10 => 'Adipose',
			(int) 11 => 'Adrenal',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Colon',
			(int) 16 => 'Heart',
			(int) 17 => 'Kidney',
			(int) 18 => 'Liver',
			(int) 19 => 'Lung',
			(int) 20 => 'Muscle',
			(int) 21 => 'Ovary',
			(int) 22 => 'Placenta',
			(int) 23 => 'Testis',
			(int) 24 => 'Brain',
			(int) 25 => 'Colon',
			(int) 26 => 'Kidney',
			(int) 27 => 'Liver',
			(int) 28 => 'Adipose',
			(int) 29 => 'Adrenal',
			(int) 30 => 'Brain',
			(int) 31 => 'Breast',
			(int) 32 => 'Colon',
			(int) 33 => 'Kidney',
			(int) 34 => 'Liver',
			(int) 35 => 'Lung',
			(int) 36 => 'Muscle',
			(int) 37 => 'Ovary',
			(int) 38 => 'Placenta',
			(int) 39 => 'Testis',
			(int) 40 => 'Breast',
			(int) 41 => 'Colon',
			(int) 42 => 'Kidney',
			(int) 43 => 'Liver',
			(int) 44 => 'Muscle',
			(int) 45 => 'Ovary',
			(int) 46 => 'Breast',
			(int) 47 => 'Colon',
			(int) 48 => 'Lung',
			(int) 49 => 'Brain',
			(int) 50 => 'Heart',
			(int) 51 => 'Brain',
			(int) 52 => 'Heart',
			(int) 53 => 'Testis',
			(int) 54 => 'Bladder',
			(int) 55 => 'Brain',
			(int) 56 => 'Breast',
			(int) 57 => 'Colon',
			(int) 58 => 'Kidney',
			(int) 59 => 'Liver',
			(int) 60 => 'Lung',
			(int) 61 => 'Ovary',
			(int) 62 => 'Testis',
			(int) 63 => 'Brain',
			(int) 64 => 'Colon',
			(int) 65 => 'Heart',
			(int) 66 => 'Kidney',
			(int) 67 => 'Muscle',
			(int) 68 => 'Ovary',
			(int) 69 => 'Placenta',
			(int) 70 => 'Breast',
			(int) 71 => 'Ovary',
			(int) 72 => 'Testis'
		)
	),
	'CIL_0007P5_000A' => array(
		'genes_in_region' => array(
			'ENSMUSG00000019777' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000044499' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000069662' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Kidney',
			(int) 8 => 'Liver',
			(int) 9 => 'Lung',
			(int) 10 => 'Muscle',
			(int) 11 => 'Ovary',
			(int) 12 => 'Placenta',
			(int) 13 => 'Testis',
			(int) 14 => 'Adipose',
			(int) 15 => 'Breast',
			(int) 16 => 'Liver',
			(int) 17 => 'Lung',
			(int) 18 => 'Ovary',
			(int) 19 => 'Brain',
			(int) 20 => 'Ovary',
			(int) 21 => 'Placenta',
			(int) 22 => 'Testis',
			(int) 23 => 'Adipose',
			(int) 24 => 'Bladder',
			(int) 25 => 'Brain',
			(int) 26 => 'Breast',
			(int) 27 => 'Colon',
			(int) 28 => 'Heart',
			(int) 29 => 'Ovary',
			(int) 30 => 'Adipose',
			(int) 31 => 'Adrenal',
			(int) 32 => 'Bladder',
			(int) 33 => 'Brain',
			(int) 34 => 'Breast',
			(int) 35 => 'Colon',
			(int) 36 => 'Heart',
			(int) 37 => 'Kidney',
			(int) 38 => 'Liver',
			(int) 39 => 'Lung',
			(int) 40 => 'Muscle',
			(int) 41 => 'Ovary',
			(int) 42 => 'Bladder',
			(int) 43 => 'Brain',
			(int) 44 => 'Liver',
			(int) 45 => 'Muscle',
			(int) 46 => 'Ovary',
			(int) 47 => 'Testis',
			(int) 48 => 'Adipose',
			(int) 49 => 'Colon',
			(int) 50 => 'Kidney',
			(int) 51 => 'Ovary',
			(int) 52 => 'Adrenal',
			(int) 53 => 'Breast',
			(int) 54 => 'Colon',
			(int) 55 => 'Heart',
			(int) 56 => 'Kidney',
			(int) 57 => 'Lung',
			(int) 58 => 'Ovary',
			(int) 59 => 'Placenta',
			(int) 60 => 'Adipose',
			(int) 61 => 'Adrenal',
			(int) 62 => 'Bladder',
			(int) 63 => 'Brain',
			(int) 64 => 'Breast',
			(int) 65 => 'Colon',
			(int) 66 => 'Heart',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Lung',
			(int) 70 => 'Muscle',
			(int) 71 => 'Ovary',
			(int) 72 => 'Placenta',
			(int) 73 => 'Testis'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_0007P5_0008',
		'tax_id' => '9606',
		'chromosome' => '6',
		'seq_start' => '113884878',
		'seq_end' => '113887000',
		'region_length' => '2122',
		'region_type' => 'UCNEbase',
		'el_id' => 'MARCKS'
	)
)
$gene_el = array(
	'ENST00000434296' => array(
		'Adipose' => array(
			'average_FPKM' => '0.018',
			'stddev_FPKM' => '0.00'
		),
		'Adrenal' => array(
			'average_FPKM' => '0.344',
			'stddev_FPKM' => '0.00'
		),
		'Bladder' => array(
			'average_FPKM' => '0.063',
			'stddev_FPKM' => '0.00'
		),
		'Brain' => array(
			'average_FPKM' => '0.175',
			'stddev_FPKM' => '0.02'
		),
		'Breast' => array(
			'average_FPKM' => '0.073',
			'stddev_FPKM' => '0.04'
		),
		'Colon' => array(
			'average_FPKM' => '0.288',
			'stddev_FPKM' => '0.22'
		),
		'Heart' => array(
			'average_FPKM' => '0.016',
			'stddev_FPKM' => '0.01'
		),
		'Kidney' => array(
			'average_FPKM' => '0.223',
			'stddev_FPKM' => '0.05'
		),
		'Liver' => array(
			'average_FPKM' => '0.279',
			'stddev_FPKM' => '0.02'
		),
		'Lung' => array(
			'average_FPKM' => '0.467',
			'stddev_FPKM' => '0.06'
		),
		'Ovary' => array(
			'average_FPKM' => '0.225',
			'stddev_FPKM' => '0.13'
		),
		'Placenta' => array(
			'average_FPKM' => '0.128',
			'stddev_FPKM' => '0.05'
		),
		'Testis' => array(
			'average_FPKM' => '0.044',
			'stddev_FPKM' => '0.01'
		)
	)
)
$gene_key = 'ENSG00000227502'
$is_first = false
$tran_el = array(
	'Adipose' => array(
		'average_FPKM' => '0.018',
		'stddev_FPKM' => '0.00'
	),
	'Adrenal' => array(
		'average_FPKM' => '0.344',
		'stddev_FPKM' => '0.00'
	),
	'Bladder' => array(
		'average_FPKM' => '0.063',
		'stddev_FPKM' => '0.00'
	),
	'Brain' => array(
		'average_FPKM' => '0.175',
		'stddev_FPKM' => '0.02'
	),
	'Breast' => array(
		'average_FPKM' => '0.073',
		'stddev_FPKM' => '0.04'
	),
	'Colon' => array(
		'average_FPKM' => '0.288',
		'stddev_FPKM' => '0.22'
	),
	'Heart' => array(
		'average_FPKM' => '0.016',
		'stddev_FPKM' => '0.01'
	),
	'Kidney' => array(
		'average_FPKM' => '0.223',
		'stddev_FPKM' => '0.05'
	),
	'Liver' => array(
		'average_FPKM' => '0.279',
		'stddev_FPKM' => '0.02'
	),
	'Lung' => array(
		'average_FPKM' => '0.467',
		'stddev_FPKM' => '0.06'
	),
	'Ovary' => array(
		'average_FPKM' => '0.225',
		'stddev_FPKM' => '0.13'
	),
	'Placenta' => array(
		'average_FPKM' => '0.128',
		'stddev_FPKM' => '0.05'
	),
	'Testis' => array(
		'average_FPKM' => '0.044',
		'stddev_FPKM' => '0.01'
	)
)
$tran_key = 'ENST00000434296'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
MARCKS		UCNEbase	9606	6:113884878-113887000
Gene		Transcript	Position	Biotype