C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frequently rearranged in advanced T cell lymphomas 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059231 Frat2-201 ENSMUSG00000047604 10090 - 19:41845978-41848132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059231
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059231 1.718±0.00 1.084±0.23 5.465±2.09 2.083±0.54 21.963±2.08 0.687±0.19 0.605±0.15 3.669±2.56 1.831±0.18 4.841±0.46 5.803±1.07 1.554±0.37 27.988±10.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SO CIL_0008SO_0002 VISTA 19:41258217-41859329
CIL_0004I4 CIL_0004I4_0002 CGP 19:41845978-41896153

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016055 IGI Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371019 FRAT2-001 protein_coding Homo_sapiens 0 627
ENST00000371021 FRAT1-001 protein_coding Homo_sapiens 0 379

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