C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin D-type binding-protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566515 CCNDBP1-009 ENSG00000166946 9606 + 15:43185328-43195164 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaENST00000566515
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000566515 1.754±0.00 4.239±0.00 4.588±0.00 3.274±0.00 9.336±0.00 2.895±0.00 7.872±0.00 4.281±0.00 21.252±3.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0001 CGP 15:43123279-43197176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007049 IEA cell cycle
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171260 Ccndbp1-201 protein_coding Mus_musculus 0 878
ENSMUST00000099488 Ccndbp1-003 protein_coding Mus_musculus 0 878
ENSMUST00000060455 Ccndbp1-001 protein_coding Mus_musculus 0 878
ENSMUST00000099489 Ccndbp1-002 protein_coding Mus_musculus 0 785
ENSMUST00000140468 Ccndbp1-005 processed_transcript Mus_musculus 0 424

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