C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CXXC finger 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060722 Cxxc5-201 ENSMUSG00000046668 10090 + 18:35829818-35861687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060722
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060722 8.731±4.43 6.870±1.78 5.708±1.94 15.653±5.23 6.889±4.17 3.132±0.91 2.413±0.00 31.451±4.11 9.992±2.85 3.136±1.16 3.566±1.62 8.893±4.91 16.827±6.91 9.782±5.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000549 CIL_000549_0002 CGP 18:35771559-35861687
CIL_00053Z CIL_00053Z_0002 CGP 18:35829818-36014715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004871 IEA signal transducer activity
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0007165 IEA signal transduction
GO:0008270 IEA zinc ion binding
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302517 CXXC5-001 protein_coding Homo_sapiens 0 2335
ENST00000502295 CXXC5-005 protein_coding Homo_sapiens 0 279
ENST00000502336 CXXC5-011 protein_coding Homo_sapiens 0 322
ENST00000502716 CXXC5-014 protein_coding Homo_sapiens 0 688
ENST00000503511 CXXC5-016 protein_coding Homo_sapiens 0 337
ENST00000504844 CXXC5-010 protein_coding Homo_sapiens 0 606
ENST00000504944 CXXC5-006 protein_coding Homo_sapiens 0 366
ENST00000505812 CXXC5-012 processed_transcript Homo_sapiens 0 228
ENST00000507139 CXXC5-009 protein_coding Homo_sapiens 2e-37 159
ENST00000509238 CXXC5-008 protein_coding Homo_sapiens 0 361
ENST00000511048 CXXC5-002 protein_coding Homo_sapiens 0 2128
ENST00000511457 CXXC5-017 protein_coding Homo_sapiens 0 754
ENST00000511591 CXXC5-013 protein_coding Homo_sapiens 3e-34 148
ENST00000512816 CXXC5-007 protein_coding Homo_sapiens 0 303
ENST00000515038 CXXC5-015 processed_transcript Homo_sapiens 0 1011
ENST00000520967 CXXC5-018 protein_coding Homo_sapiens 0 494

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