C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin associated protein-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060839 Cntnap2-002 ENSMUSG00000039419 10090 + 6:47244402-47299570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000060839
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000060839 0.905±0.62 0.453±0.11 12.040±2.40 21.068±10.45 0.280±0.18 0.100±0.03 0.072±0.04 0.429±0.28 5.067±0.72 0.778±0.37 0.180±0.18 6.409±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0002 CGP 6:43345001-47301369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005769 ISS early endosome
GO:0005794 ISS Golgi apparatus
GO:0007155 TAS cell adhesion
GO:0008038 TAS neuron recognition
GO:0008076 IDA voltage-gated potassium channel complex
GO:0009986 ISS cell surface
GO:0016020 ISS membrane
GO:0019899 ISS enzyme binding
GO:0021761 IEP limbic system development
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0030673 ISS axolemma
GO:0031175 IGI neuron projection development
GO:0034613 IMP cellular protein localization
GO:0043025 ISS neuronal cell body
GO:0043204 ISS perikaryon
GO:0044224 IDA juxtaparanode region of axon
GO:0045163 IMP clustering of voltage-gated potassium channels
GO:0071205 IMP protein localization to juxtaparanode region of axon

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361727 CNTNAP2-001 protein_coding Homo_sapiens 0 1123
ENST00000463592 CNTNAP2-003 processed_transcript Homo_sapiens 0 1168
ENST00000602734 CNTNAP2-004 processed_transcript Homo_sapiens 0 1149
ENST00000613345 AC237044.1-201 protein_coding Homo_sapiens 0 1162

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