C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synaptojanin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000061091  |
Synj2-004 |
ENSMUSG00000023805 |
10090 | + |
17:5975641-6044290  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00055D | CIL_00055D_0002 | CGP | 17:5841328-6044290 |
| CIL_00055M | CIL_00055M_0002 | CGP | 17:5941280-6079741 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003723 | IEA | RNA binding |
| GO:0004439 | IDA | phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity |
| GO:0005737 | IEA | cytoplasm |
| GO:0016020 | IEA | membrane |
| GO:0046856 | IEA | phosphatidylinositol dephosphorylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000355585
|
SYNJ2-002 | protein_coding | Homo_sapiens | 0 | 3740 |
|
ENST00000367112
|
SYNJ2-003 | protein_coding | Homo_sapiens | 0 | 981 |
|
ENST00000367122
|
SYNJ2-201 | protein_coding | Homo_sapiens | 0 | 1740 |
|
ENST00000485863
|
SYNJ2-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 525 |
