C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-serine-rich nuclear protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061457 Csrnp2-201 ENSMUSG00000044636 10090 - 15:100479570-100495239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061457 1.894±0.75 2.849±0.22 1.643±0.59 10.552±5.69 1.965±0.50 1.400±0.39 0.798±0.33 1.003±0.24 0.624±0.16 1.674±0.38 0.815±0.16 5.090±1.97 4.274±2.19 1.296±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B3 CIL_0007B3_0002 CGP 15:100469034-100495239
CIL_00033J CIL_00033J_0003 CGP 15:100479570-100552008

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010923 ISS negative regulation of phosphatase activity
GO:0019902 ISS phosphatase binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110069 CSRNP3-201 protein_coding Danio_rerio 0 298
ENST00000228515 CSRNP2-001 protein_coding Homo_sapiens 0 1796

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