C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-serine-rich nuclear protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000228515 CSRNP2-001 ENSG00000110925 9606 - 12:51061205-51083550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000228515
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000228515 2.751±0.00 9.089±0.00 2.456±0.00 1.589±0.67 2.573±2.19 4.335±0.00 1.930±0.82 6.670±0.00 1.217±0.63 4.770±3.01 4.907±0.91 24.167±7.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B3 CIL_0007B3_0001 CGP 12:51047962-51083664
CIL_00033J CIL_00033J_0002 CGP 12:51061205-51173134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001228 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010923 IDA negative regulation of phosphatase activity
GO:0019902 IDA phosphatase binding
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061457 Csrnp2-201 protein_coding Mus_musculus 0 1796

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