C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063717 Phtf1-001 ENSMUSG00000058388 10090 + 3:103968258-104007488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063717 3.491±1.81 3.659±0.74 3.106±0.00 7.780±0.00 2.779±0.91 2.167±0.62 0.945±0.30 2.128±0.84 1.125±0.79 4.786±1.30 1.270±0.25 4.667±0.79 3.056±0.00 9.555±1.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357783 PHTF1-002 protein_coding Homo_sapiens 0 2534
ENST00000369598 PHTF1-011 protein_coding Homo_sapiens 0 2257
ENST00000369600 PHTF1-010 protein_coding Homo_sapiens 0 2627
ENST00000369604 PHTF1-001 protein_coding Homo_sapiens 0 3223
ENST00000393357 PHTF1-201 protein_coding Homo_sapiens 0 3110
ENST00000412670 PHTF1-004 protein_coding Homo_sapiens 0 1236
ENST00000446739 PHTF1-006 protein_coding Homo_sapiens 0 472
ENST00000472612 PHTF1-007 processed_transcript Homo_sapiens 0 372
ENST00000474926 PHTF1-003 processed_transcript Homo_sapiens 0 2257
ENST00000481652 PHTF1-009 processed_transcript Homo_sapiens 0 610
ENST00000493212 PHTF1-005 processed_transcript Homo_sapiens 0 211

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