C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063788 Slc25a42-201 ENSMUSG00000002346 10090 - 8:70184340-70212256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063788 11.047±6.13 17.320±2.69 1.378±0.27 1.230±0.00 6.172±2.60 6.089±2.27 14.505±2.89 19.313±6.17 14.775±6.23 3.466±0.78 3.633±0.94 5.677±2.79 1.888±2.26 1.281±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005347 ISS ATP transmembrane transporter activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0015217 ISS ADP transmembrane transporter activity
GO:0015228 ISS coenzyme A transmembrane transporter activity
GO:0015866 ISS ADP transport
GO:0015867 ISS ATP transport
GO:0016021 IEA integral component of membrane
GO:0035349 ISS coenzyme A transmembrane transport
GO:0043262 ISS adenosine-diphosphatase activity
GO:0080121 ISS AMP transport
GO:0080122 ISS AMP transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318596 SLC25A42-001 protein_coding Homo_sapiens 0 1037
ENST00000594070 SLC25A42-002 retained_intron Homo_sapiens 0 568
ENST00000596819 SLC25A42-005 retained_intron Homo_sapiens 0 326
ENST00000597661 SLC25A42-003 retained_intron Homo_sapiens 0 344
ENST00000600251 SLC25A42-004 retained_intron Homo_sapiens 2.94273e-44 182
ENST00000600275 SLC25A42-006 processed_transcript Homo_sapiens 1.96182e-44 182

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