C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sno, strawberry notch homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065263 Sbno1-201 ENSMUSG00000038095 10090 - 5:124368702-124425914 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000065263
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000065263 0.605±0.00 2.569±0.00 3.204±1.40 9.534±4.07 1.925±0.72 3.069±0.00 0.700±0.16 1.969±0.82 2.215±2.26 1.115±0.56 2.908±1.66 2.242±0.86 7.444±3.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0003J6 CIL_0003J6_0002 CGP 5:124345417-124425914
CIL_000665 CIL_000665_0002 CGP 5:124368702-124462308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267176 SBNO1-001 protein_coding Homo_sapiens 0 6222
ENST00000420886 SBNO1-201 protein_coding Homo_sapiens 0 6242
ENST00000602398 SBNO1-002 protein_coding Homo_sapiens 0 5341

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