C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CWC22 spliceosome-associated protein homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065889 Cwc22-001 ENSMUSG00000027014 10090 - 2:77895653-77946375 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungMuscleOvaryENSMUST00000065889
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000065889 0.620±0.09 0.344±0.01 1.382±0.00 0.523±0.18 0.657±0.27 0.799±0.09 1.515±0.00 0.648±0.06 0.786±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C1 CIL_0004C1_0003 CGP 2:77410634-77946375
CIL_0004C2 CIL_0004C2_0003 CGP 2:77881159-78921293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005681 ISS spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000404136 CWC22-002 protein_coding Homo_sapiens 0 2194
ENST00000410053 CWC22-001 protein_coding Homo_sapiens 0 2392

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