C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate 6-O-sulfotransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065904 Hs6st3-201 ENSMUSG00000053465 10090 + 14:119138415-119869594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065904
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065904 0.031±0.01 0.367±0.05 0.018±0.01 0.046±0.01 0.070±0.03 0.024±0.00 0.055±0.03 0.022±0.01 0.455±0.19 0.048±0.00 0.123±0.12 0.030±0.02 0.309±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040V CIL_00040V_0002 CGP 14:118985039-119869594
CIL_0000O5 CIL_0000O5_0002 CGP 14:119138415-120042435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015015 IDA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IDA heparan sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002250 hs6st2-001 protein_coding Danio_rerio 0 322
ENSDART00000130855 CU929314.1-201 protein_coding Danio_rerio 0 207
ENST00000259241 HS6ST1-001 protein_coding Homo_sapiens 0 479
ENST00000370833 HS6ST2-201 protein_coding Homo_sapiens 0 246
ENST00000370836 HS6ST2-002 protein_coding Homo_sapiens 0 422
ENST00000376705 HS6ST3-001 protein_coding Homo_sapiens 0 1836
ENST00000406696 HS6ST2-202 protein_coding Homo_sapiens 0 422
ENST00000469019 HS6ST1-003 processed_transcript Homo_sapiens 0 233
ENST00000481504 HS6ST1P1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000494089 HS6ST1-002 processed_transcript Homo_sapiens 0 233
ENST00000521489 HS6ST2-004 protein_coding Homo_sapiens 0 246
ENST00000620595 HS6ST3-201 protein_coding Homo_sapiens 0 904

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