C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate 6-O-sulfotransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376705 HS6ST3-001 ENSG00000185352 9606 + 13:96090839-96839562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyMuscleOvaryTestisENST00000376705
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Muscle Ovary Testis
ENST00000376705 0.256±0.00 0.187±0.00 2.309±0.02 0.137±0.00 0.296±0.22 0.237±0.00 0.108±0.00 0.050±0.00 0.283±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040V CIL_00040V_0001 CGP 13:95801580-96839562
CIL_0000O5 CIL_0000O5_0001 CGP 13:96090839-96994730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008146 IEA sulfotransferase activity
GO:0015015 IEA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IEA heparan sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065904 Hs6st3-201 protein_coding Mus_musculus 0 1836
ENSDART00000065929 hs6st3b-001 protein_coding Danio_rerio 0 451
ENSMUST00000114871 Hs6st2-002 protein_coding Mus_musculus 0 433
ENSDART00000002250 hs6st2-001 protein_coding Danio_rerio 0 303
ENSMUST00000142738 Hs6st2-003 retained_intron Mus_musculus 0 276
ENSMUST00000088172 Hs6st2-001 protein_coding Mus_musculus 0 276
ENSDART00000134756 hs6st1a-001 protein_coding Danio_rerio 6e-38 165

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