C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331173 CSTF2T-001 ENSG00000177613 9606 - 10:51695487-51699591 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331173 4.957±0.00 6.443±0.00 2.341±0.00 4.945±0.53 4.416±1.41 3.302±0.40 4.143±1.97 4.366±2.02 4.012±1.22 3.511±0.00 2.946±1.55 6.283±3.62 6.391±2.17 7.811±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EK CIL_0006EK_0002 CGP 10:50799409-52298350
CIL_0000ID CIL_0000ID_0001 CGP 10:50991358-52298350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066039 Cstf2t-201 protein_coding Mus_musculus 0 1668

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