C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066401 Ctsd-003 ENSMUSG00000007891 10090 - 7:142375929-142387819 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000066401
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000066401 557.683±135.51 172.199±59.91 99.433±0.00 451.658±81.86 35.244±6.09 97.053±11.70 53.197±4.56 76.701±16.87 70.816±8.33 154.679±42.90 210.918±38.92 5.391±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_00048D CIL_00048D_0002 CGP 7:142325837-142388038
CIL_00048K CIL_00048K_0002 CGP 7:142371148-142440396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0004190 IDA aspartic-type endopeptidase activity
GO:0005739 IDA mitochondrion
GO:0005764 IDA lysosome
GO:0006508 IC proteolysis
GO:0008233 IDA peptidase activity

Homologs

No Homologs available.

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