C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000117984-ENSG00000149043 CGP 9606 11:1752752-1837521
GeneTranscriptPositionBiotype
ENSG00000117984 (CTSD)
cathepsin D 		ENST00000236671 (CTSD-001) 1752752-1763992 protein_coding
ENST00000367196 (CTSD-002) 1757324-1762403 protein_coding
ENST00000429746 (CTSD-004) 1753383-1754946 protein_coding
ENST00000433655 (CTSD-006) 1752775-1763901 nonsense_mediated_decay
ENST00000438213 (CTSD-005) 1754024-1761540 protein_coding
ENST00000497544 (CTSD-003) 1753805-1755348 retained_intron
ENSG00000149043 (SYT8)
synaptotagmin VIII 		ENST00000341958 (SYT8-004) 1834804-1837521 protein_coding
ENST00000381968 (SYT8-002) 1834444-1837521 protein_coding
ENST00000381978 (SYT8-008) 1834590-1837521 protein_coding
ENST00000417052 (SYT8-010) 1828543-1835926 protein_coding
ENST00000424556 (SYT8-015) 1834871-1837521 nonsense_mediated_decay
ENST00000430303 (SYT8-011) 1828307-1835934 protein_coding
ENST00000464897 (SYT8-003) 1834476-1837521 retained_intron
ENST00000475245 (SYT8-013) 1834572-1836104 retained_intron
ENST00000479089 (SYT8-006) 1834310-1837521 retained_intron
ENST00000479276 (SYT8-007) 1831087-1837521 retained_intron
ENST00000482118 (SYT8-005) 1835106-1835582 retained_intron
ENST00000483280 (SYT8-012) 1835560-1836418 processed_transcript
ENST00000490707 (SYT8-009) 1833792-1837521 retained_intron
ENST00000494431 (SYT8-014) 1836029-1836552 retained_intron
ENSG00000229512 (AC068580.5)
 ENST00000446489 (AC068580.5-001) 1763009-1763749 sense_intronic
ENSG00000230080 (AC139143.2)
 ENST00000441772 (AC139143.2-001) 1802889-1804095 processed_pseudogene
ENSG00000230834 (AC068580.7)
 ENST00000449749 (AC068580.7-001) 1776930-1778388 lincRNA
ENSG00000230980 (RPL36AP39)
ribosomal protein L36a pseudogene 39 		ENST00000445859 (RPL36AP39-001) 1792553-1792870 processed_pseudogene
ENSG00000250644 (RP11-295K3.1)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000415840} 		ENST00000427721 (RP11-295K3.1-001) 1747806-1759051 protein_coding
CIL_00048K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007891-ENSMUSG00000031098 CGP 10090 7:142371148-142440396
GeneTranscriptPositionBiotype
ENSMUSG00000007891 (Ctsd)
cathepsin D 		ENSMUST00000066401 (Ctsd-003) 142375929-142387819 nonsense_mediated_decay
ENSMUST00000133843 (Ctsd-004) 142371148-142382667 protein_coding
ENSMUST00000151120 (Ctsd-001) 142375910-142388038 protein_coding
ENSMUST00000153679 (Ctsd-002) 142383194-142387819 retained_intron
ENSMUSG00000031098 (Syt8)
synaptotagmin VIII 		ENSMUST00000097939 (Syt8-002) 142435001-142440328 protein_coding
ENSMUST00000105976 (Syt8-001) 142435001-142440328 protein_coding
ENSMUST00000105977 (Syt8-010) 142438132-142438542 protein_coding
ENSMUST00000118276 (Syt8-003) 142434977-142440396 protein_coding
ENSMUST00000122393 (Syt8-009) 142436834-142440305 protein_coding
ENSMUST00000124963 (Syt8-006) 142439015-142440312 retained_intron
ENSMUST00000128481 (Syt8-008) 142434946-142438968 processed_transcript
ENSMUST00000145964 (Syt8-005) 142438421-142439984 retained_intron
ENSMUST00000148896 (Syt8-004) 142435001-142440328 retained_intron
ENSMUST00000150192 (Syt8-007) 142434850-142439875 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048K_0001ENSG00000117984ENST00000236671ENST00000367196ENST00000429746ENST00000433655ENST00000438213ENST00000497544ENSG00000149043ENST00000341958ENST00000381968ENST00000381978ENST00000417052ENST00000424556ENST00000430303ENST00000464897ENST00000475245ENST00000479089ENST00000479276ENST00000482118ENST00000483280ENST00000490707ENST00000494431ENSG00000229512ENST00000446489ENSG00000230080ENST00000441772ENSG00000230834ENST00000449749ENSG00000230980ENST00000445859ENSG00000250644ENST00000427721CIL_00048K_0002ENSMUSG00000007891ENSMUST00000066401ENSMUST00000133843ENSMUST00000151120ENSMUST00000153679ENSMUSG00000031098ENSMUST00000097939ENSMUST00000105976ENSMUST00000105977ENSMUST00000118276ENSMUST00000122393ENSMUST00000124963ENSMUST00000128481ENSMUST00000145964ENSMUST00000148896ENSMUST00000150192
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048K_0001ENSG00000117984ENST00000236671ENST00000429746ENST00000433655ENST00000438213ENSG00000149043ENST00000341958ENST00000381968ENST00000381978ENST00000417052ENST00000424556ENST00000464897ENST00000479089ENST00000479276ENST00000482118ENST00000483280ENST00000490707ENSG00000229512ENST00000446489ENSG00000230080ENST00000441772ENSG00000230834ENST00000449749ENSG00000230980ENST00000445859ENSG00000250644ENST00000427721CIL_00048K_0002ENSMUSG00000007891ENSMUST00000066401ENSMUST00000133843ENSMUST00000151120ENSMUSG00000031098ENSMUST00000097939ENSMUST00000105976ENSMUST00000105977ENSMUST00000118276ENSMUST00000122393ENSMUST00000124963ENSMUST00000145964ENSMUST00000148896ENSMUST00000150192
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117984 ENST00000236671 250.278±0.00 267.725±0.00 15.564±0.00 68.497±54.09 192.537±170.46 85.469±73.32 121.928±111.56 384.184±345.45 133.277±121.66 181.112±148.15 267.977±256.17 201.142±121.21 369.209±87.36 89.608±3.52
ENST00000367196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429746 N/A N/A 8.811±0.00 N/A N/A 7.053±0.00 N/A N/A N/A 17.771±0.00 N/A N/A N/A N/A
ENST00000433655 N/A 62.328±0.00 N/A 34.513±0.00 N/A N/A 129.877±0.00 N/A 135.978±0.00 131.713±0.00 245.837±0.00 140.256±47.57 113.939±0.00 28.883±0.00
ENST00000438213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.661±0.00 N/A N/A
ENST00000497544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149043 ENST00000341958 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENST00000381968 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 2.242±0.00 N/A N/A 1.278±0.00 N/A
ENST00000381978 N/A N/A N/A N/A 1.479±1.43 N/A N/A 0.262±0.00 0.078±0.00 1.631±0.00 N/A 0.458±0.53 8.124±1.12 N/A
ENST00000417052 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424556 N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A N/A 0.211±0.00
ENST00000430303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464897 N/A N/A N/A N/A 1.670±0.00 N/A N/A 0.324±0.00 N/A N/A N/A N/A 1.413±0.00 N/A
ENST00000475245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479089 N/A N/A N/A N/A 0.727±0.00 N/A N/A N/A N/A N/A N/A 0.323±0.00 1.274±0.06 N/A
ENST00000479276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.704±0.00 N/A
ENST00000482118 0.385±0.00 0.281±0.00 N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00
ENST00000490707 N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A 0.015±0.00 N/A N/A
ENST00000494431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229512 ENST00000446489 0.402±0.00 0.208±0.00 N/A N/A 0.250±0.00 0.218±0.00 0.219±0.00 0.478±0.00 0.403±0.00 2.154±0.00 0.191±0.00 N/A 0.675±0.00 N/A
ENSG00000230080 ENST00000441772 0.133±0.00 0.084±0.00 N/A 0.148±0.00 0.071±0.00 0.106±0.00 N/A 0.045±0.00 N/A 0.149±0.00 0.053±0.00 N/A N/A 0.160±0.06
ENSG00000230834 ENST00000449749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.916±1.00 N/A 0.411±0.34
ENSG00000230980 ENST00000445859 0.280±0.00 0.122±0.00 N/A N/A 0.315±0.00 N/A N/A N/A N/A 0.063±0.00 N/A 0.179±0.00 N/A 0.410±0.00
ENSG00000250644 ENST00000427721 N/A N/A N/A N/A 13.853±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007891 ENSMUST00000066401 557.683±135.51 172.199±59.91 N/A 99.433±0.00 451.658±81.86 35.244±6.09 97.053±11.70 53.197±4.56 76.701±16.87 70.816±8.33 N/A 154.679±42.90 210.918±38.92 5.391±0.00
ENSMUST00000133843 N/A N/A N/A 184.262±0.00 N/A N/A N/A N/A N/A N/A N/A 411.498±0.00 524.411±59.24 23.427±0.00
ENSMUST00000151120 885.532±258.53 370.678±64.37 412.845±53.07 68.316±1.87 339.733±69.80 147.731±14.48 348.229±17.59 332.921±51.74 159.643±39.79 349.537±11.52 239.173±5.02 299.579±56.23 293.341±28.93 29.104±13.79
ENSMUST00000153679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031098 ENSMUST00000097939 N/A N/A N/A N/A N/A 0.419±0.00 N/A 0.108±0.00 0.020±0.00 N/A N/A 0.253±0.00 0.336±0.00 N/A
ENSMUST00000105976 0.605±0.00 N/A N/A 0.030±0.00 N/A 0.437±0.03 0.027±0.00 N/A N/A N/A N/A 0.232±0.15 N/A N/A
ENSMUST00000105977 4.927±0.00 N/A N/A N/A 0.753±0.26 3.085±1.60 N/A 0.880±0.37 N/A N/A 0.229±0.00 2.340±1.36 N/A 0.422±0.19
ENSMUST00000118276 0.378±0.00 0.072±0.02 29.453±8.12 0.023±0.00 0.147±0.00 0.229±0.09 N/A 0.144±0.11 0.038±0.00 N/A 0.055±0.02 0.223±0.09 3.791±4.26 0.057±0.00
ENSMUST00000122393 N/A N/A N/A N/A 0.193±0.01 0.208±0.00 0.013±0.00 N/A N/A 0.117±0.00 N/A 0.212±0.06 N/A N/A
ENSMUST00000124963 N/A 0.085±0.04 N/A 0.031±0.01 0.426±0.05 0.650±0.20 N/A 0.061±0.00 0.235±0.18 N/A 0.144±0.00 0.536±0.40 0.839±0.00 0.041±0.00
ENSMUST00000128481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145964 N/A N/A 57.217±17.75 0.026±0.01 0.251±0.10 N/A N/A 0.084±0.03 0.013±0.00 N/A 0.152±0.07 0.299±0.17 5.663±6.34 0.079±0.00
ENSMUST00000148896 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.115±0.12 0.309±0.21 0.297±0.00 0.307±0.00 5.180±0.00 0.086±0.00
ENSMUST00000150192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.02 0.141±0.00 7.012±0.00 N/A

Loading