C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000244242-ENSG00000250644 CGP 9606 11:1732410-1759051
GeneTranscriptPositionBiotype
ENSG00000117984 (CTSD)
cathepsin D 		ENST00000236671 (CTSD-001) 1752752-1763992 protein_coding
ENST00000367196 (CTSD-002) 1757324-1762403 protein_coding
ENST00000429746 (CTSD-004) 1753383-1754946 protein_coding
ENST00000433655 (CTSD-006) 1752775-1763901 nonsense_mediated_decay
ENST00000438213 (CTSD-005) 1754024-1761540 protein_coding
ENST00000497544 (CTSD-003) 1753805-1755348 retained_intron
ENSG00000250644 (RP11-295K3.1)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000415840} 		ENST00000427721 (RP11-295K3.1-001) 1747806-1759051 protein_coding
CIL_00048D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045777-ENSMUSG00000007891 CGP 10090 7:142325837-142388038
GeneTranscriptPositionBiotype
ENSMUSG00000007891 (Ctsd)
cathepsin D 		ENSMUST00000066401 (Ctsd-003) 142375929-142387819 nonsense_mediated_decay
ENSMUST00000133843 (Ctsd-004) 142371148-142382667 protein_coding
ENSMUST00000151120 (Ctsd-001) 142375910-142388038 protein_coding
ENSMUST00000153679 (Ctsd-002) 142383194-142387819 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048D_0001ENSG00000117984ENST00000236671ENST00000367196ENST00000429746ENST00000433655ENST00000438213ENST00000497544ENSG00000250644ENST00000427721CIL_00048D_0002ENSMUSG00000007891ENSMUST00000066401ENSMUST00000133843ENSMUST00000151120ENSMUST00000153679
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048D_0001ENSG00000117984ENST00000236671ENST00000429746ENST00000433655ENST00000438213ENSG00000250644ENST00000427721CIL_00048D_0002ENSMUSG00000007891ENSMUST00000066401ENSMUST00000133843ENSMUST00000151120
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117984 ENST00000236671 250.278±0.00 267.725±0.00 15.564±0.00 68.497±54.09 192.537±170.46 85.469±73.32 121.928±111.56 384.184±345.45 133.277±121.66 181.112±148.15 267.977±256.17 201.142±121.21 369.209±87.36 89.608±3.52
ENST00000367196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429746 N/A N/A 8.811±0.00 N/A N/A 7.053±0.00 N/A N/A N/A 17.771±0.00 N/A N/A N/A N/A
ENST00000433655 N/A 62.328±0.00 N/A 34.513±0.00 N/A N/A 129.877±0.00 N/A 135.978±0.00 131.713±0.00 245.837±0.00 140.256±47.57 113.939±0.00 28.883±0.00
ENST00000438213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.661±0.00 N/A N/A
ENST00000497544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250644 ENST00000427721 N/A N/A N/A N/A 13.853±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007891 ENSMUST00000066401 557.683±135.51 172.199±59.91 N/A 99.433±0.00 451.658±81.86 35.244±6.09 97.053±11.70 53.197±4.56 76.701±16.87 70.816±8.33 N/A 154.679±42.90 210.918±38.92 5.391±0.00
ENSMUST00000133843 N/A N/A N/A 184.262±0.00 N/A N/A N/A N/A N/A N/A N/A 411.498±0.00 524.411±59.24 23.427±0.00
ENSMUST00000151120 885.532±258.53 370.678±64.37 412.845±53.07 68.316±1.87 339.733±69.80 147.731±14.48 348.229±17.59 332.921±51.74 159.643±39.79 349.537±11.52 239.173±5.02 299.579±56.23 293.341±28.93 29.104±13.79
ENSMUST00000153679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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