C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067757 Pld1-002 ENSMUSG00000027695 10090 + 3:27984314-28133234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067757
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067757 1.256±0.76 0.153±0.01 4.143±0.05 0.651±0.25 1.233±0.96 2.979±1.24 0.683±0.07 1.076±0.49 0.690±0.32 0.706±0.00 0.306±0.15 1.728±1.58 1.584±0.93 0.216±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070U CIL_00070U_0002 CGP 3:27938695-28675858

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005768 ISO endosome
GO:0005794 ISO Golgi apparatus
GO:0006654 ISO phosphatidic acid biosynthetic process
GO:0008654 ISO phospholipid biosynthetic process
GO:0035091 IEA phosphatidylinositol binding
GO:0050830 IMP defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351298 PLD1-001 protein_coding Homo_sapiens 0 1688
ENST00000356327 PLD1-002 protein_coding Homo_sapiens 0 3175
ENST00000418087 PLD1-010 protein_coding Homo_sapiens 0 497
ENST00000440204 PLD1-011 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000446289 PLD1-003 protein_coding Homo_sapiens 0 741
ENST00000465816 PLD1-014 processed_transcript Homo_sapiens 0 736
ENST00000471075 PLD1-004 retained_intron Homo_sapiens 0 608
ENST00000475273 PLD1-016 processed_transcript Homo_sapiens 0 660
ENST00000481505 PLD1-013 retained_intron Homo_sapiens 0 521
ENST00000498278 PLD1-012 retained_intron Homo_sapiens 0 911

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