C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00070U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056228-ENSDARG00000056218 CGP 7955 2:25708726-25964659
GeneTranscriptPositionBiotype
ENSDARG00000056218 (tnika)
TRAF2 and NCK interacting kinase a 		ENSDART00000051234 (tnika-001) 25806282-25964659 protein_coding
ENSDARG00000094803 (si:dkey-153n9.5)
si:dkey-153n9.5 		ENSDART00000133163 (si:dkey-153n9.5-002) 25963422-25964711 retained_intron
ENSDART00000147692 (si:dkey-153n9.5-001) 25962722-25965002 antisense
CIL_00070U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027695-ENSMUSG00000027692 CGP 10090 3:27938695-28675858
GeneTranscriptPositionBiotype
ENSMUSG00000027692 (Tnik)
TRAF2 and NCK interacting kinase 		ENSMUST00000159236 (Tnik-001) 28263215-28675858 protein_coding
ENSMUST00000159308 (Tnik-011) 28263643-28667982 protein_coding
ENSMUST00000159680 (Tnik-010) 28263563-28668223 protein_coding
ENSMUST00000159733 (Tnik-006) 28650027-28665945 retained_intron
ENSMUST00000160307 (Tnik-007) 28263563-28668223 protein_coding
ENSMUST00000160518 (Tnik-008) 28263643-28667982 protein_coding
ENSMUST00000160934 (Tnik-003) 28263214-28670585 nonsense_mediated_decay
ENSMUST00000161214 (Tnik-005) 28263276-28360786 retained_intron
ENSMUST00000161234 (Tnik-002) 28263276-28494134 retained_intron
ENSMUST00000161423 (Tnik-004) 28409431-28596083 processed_transcript
ENSMUST00000161964 (Tnik-014) 28263643-28667982 protein_coding
ENSMUST00000162037 (Tnik-016) 28263563-28666449 retained_intron
ENSMUST00000162225 (Tnik-015) 28629872-28638469 retained_intron
ENSMUST00000162485 (Tnik-009) 28263643-28667982 protein_coding
ENSMUST00000162777 (Tnik-013) 28263643-28667982 protein_coding
ENSMUSG00000027695 (Pld1)
phospholipase D1 		ENSMUST00000067757 (Pld1-002) 27984314-28133234 protein_coding
ENSMUST00000120834 (Pld1-001) 27938695-28133239 protein_coding
ENSMUST00000123539 (Pld1-004) 27984173-28132050 nonsense_mediated_decay
ENSMUST00000125338 (Pld1-007) 27950003-28028687 protein_coding
ENSMUST00000126594 (Pld1-009) 28109759-28130795 protein_coding
ENSMUST00000127139 (Pld1-005) 27950002-27957400 processed_transcript
ENSMUST00000131842 (Pld1-006) 28069514-28086686 retained_intron
ENSMUST00000148827 (Pld1-003) 28031262-28133362 protein_coding
ENSMUST00000149017 (Pld1-008) 28041266-28046797 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070U_0001ENSDARG00000056218ENSDART00000051234ENSDARG00000094803ENSDART00000133163ENSDART00000147692CIL_00070U_0002ENSMUSG00000027692ENSMUST00000159236ENSMUST00000159308ENSMUST00000159680ENSMUST00000159733ENSMUST00000160307ENSMUST00000160518ENSMUST00000160934ENSMUST00000161214ENSMUST00000161234ENSMUST00000161423ENSMUST00000161964ENSMUST00000162037ENSMUST00000162225ENSMUST00000162485ENSMUST00000162777ENSMUSG00000027695ENSMUST00000067757ENSMUST00000120834ENSMUST00000123539ENSMUST00000125338ENSMUST00000126594ENSMUST00000127139ENSMUST00000131842ENSMUST00000148827ENSMUST00000149017
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070U_0001ENSDARG00000056218ENSDART00000051234ENSDARG00000094803ENSDART00000133163ENSDART00000147692CIL_00070U_0002ENSMUSG00000027692ENSMUST00000159236ENSMUST00000159308ENSMUST00000159680ENSMUST00000160307ENSMUST00000160518ENSMUST00000160934ENSMUST00000161214ENSMUST00000161423ENSMUST00000161964ENSMUST00000162037ENSMUST00000162485ENSMUST00000162777ENSMUSG00000027695ENSMUST00000067757ENSMUST00000120834ENSMUST00000123539ENSMUST00000131842ENSMUST00000148827
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056218 ENSDART00000051234 N/A N/A N/A 7.781±2.64 N/A N/A 1.234±0.56 1.204±0.51 0.099±0.00 N/A 0.632±0.00 N/A N/A N/A
ENSDARG00000094803 ENSDART00000133163 N/A N/A N/A 52.196±6.76 N/A N/A 11.875±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147692 N/A N/A N/A N/A N/A N/A N/A N/A 2.137±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027692 ENSMUST00000159236 0.184±0.08 0.256±0.05 1.126±0.63 1.072±0.00 0.692±0.21 0.325±0.09 1.169±0.00 0.053±0.03 0.067±0.05 0.614±0.31 0.659±0.00 0.257±0.07 0.083±0.02 0.354±0.00
ENSMUST00000159308 N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159680 0.506±0.38 0.413±0.08 N/A N/A 1.167±0.06 0.575±0.18 1.090±0.33 N/A N/A 1.903±0.77 1.653±0.81 0.842±0.47 0.200±0.00 0.986±0.34
ENSMUST00000159733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160307 N/A 1.241±0.00 N/A 6.924±4.12 N/A 0.782±0.00 0.959±0.30 0.109±0.00 0.121±0.04 N/A N/A 0.799±0.17 N/A N/A
ENSMUST00000160518 N/A 0.943±0.24 N/A N/A N/A 0.938±0.17 N/A 0.140±0.03 0.160±0.07 0.789±0.02 N/A 0.974±0.52 N/A N/A
ENSMUST00000160934 0.647±0.36 0.537±0.08 2.799±0.62 10.376±3.48 0.365±0.00 0.613±0.12 0.494±0.09 0.105±0.03 0.340±0.19 0.636±0.17 1.340±0.43 1.133±1.07 0.605±0.19 1.324±0.34
ENSMUST00000161214 N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000161234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.616±0.00 1.150±0.44 12.816±0.00
ENSMUST00000161964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.363±0.00 N/A N/A
ENSMUST00000162037 N/A N/A N/A N/A N/A 0.878±0.42 N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000162225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162485 N/A N/A N/A 31.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.056±0.00
ENSMUST00000162777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.213±0.00
ENSMUSG00000027695 ENSMUST00000067757 1.256±0.76 0.153±0.01 4.143±0.05 0.651±0.25 1.233±0.96 2.979±1.24 0.683±0.07 1.076±0.49 0.690±0.32 0.706±0.00 0.306±0.15 1.728±1.58 1.584±0.93 0.216±0.06
ENSMUST00000120834 2.443±1.07 0.170±0.14 1.530±0.55 0.276±0.03 0.821±0.29 3.498±1.85 0.866±0.18 1.109±0.46 1.180±0.47 2.545±1.17 0.230±0.04 1.192±0.47 1.761±0.68 N/A
ENSMUST00000123539 N/A N/A N/A 0.239±0.00 0.406±0.13 1.455±0.08 0.344±0.00 0.576±0.16 0.151±0.00 1.369±0.00 0.212±0.00 1.116±0.26 0.727±0.00 0.067±0.00
ENSMUST00000125338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.252±0.14
ENSMUST00000148827 0.857±0.00 0.438±0.16 0.908±0.00 0.388±0.00 0.596±0.25 2.675±1.09 0.244±0.00 0.740±0.22 0.623±0.36 1.540±0.17 0.502±0.11 1.498±0.74 0.624±0.00 0.173±0.07
ENSMUST00000149017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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