C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat (in FLII) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068116 Lrrfip1-001 ENSMUSG00000026305 10090 + 1:90998779-91128940 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068116
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068116 2.484±0.28 27.345±0.22 6.622±0.99 5.563±0.00 4.103±0.75 2.189±0.51 1.368±0.68 8.272±1.36 14.648±2.09 5.076±2.87 7.306±2.83 0.205±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L9 CIL_0008L9_0002 VISTA 1:90453497-91055787
CIL_0007RW CIL_0007RW_0002 VISTA 1:90676298-91284359
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0002H4 CIL_0002H4_0002 CGP 1:90958133-91128944
CIL_0003XV CIL_0003XV_0002 CGP 1:90998737-91170795

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244815 LRRFIP1-001 protein_coding Homo_sapiens 0 390
ENST00000289175 LRRFIP1-004 protein_coding Homo_sapiens 0 390
ENST00000308482 LRRFIP1-002 protein_coding Homo_sapiens 0 1033
ENST00000392000 LRRFIP1-003 protein_coding Homo_sapiens 0 719
ENST00000464608 LRRFIP1-015 retained_intron Homo_sapiens 0 422
ENST00000465870 LRRFIP1-011 retained_intron Homo_sapiens 0 254
ENST00000468950 LRRFIP1-009 processed_transcript Homo_sapiens 0 281
ENST00000474195 LRRFIP1-010 retained_intron Homo_sapiens 0 736
ENST00000478958 LRRFIP1-008 retained_intron Homo_sapiens 0 878
ENST00000483443 LRRFIP1-014 retained_intron Homo_sapiens 0 283
ENST00000489603 LRRFIP1-016 processed_transcript Homo_sapiens 0 409
ENST00000498774 LRRFIP1P1-001 processed_pseudogene Homo_sapiens 0 329

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