C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355703 PCNXL3-001 ENSG00000197136 9606 + 11:65615773-65637439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355703 1.187±0.00 4.698±0.00 0.448±0.00 1.245±0.86 0.774±0.06 0.971±0.68 1.843±0.00 3.927±0.00 1.842±0.00 1.924±1.09 1.618±0.00 5.405±6.53 3.094±0.77 5.777±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113615 Pcnxl3-001 protein_coding Mus_musculus 0 7849
ENSMUST00000068169 Pcnxl3-004 protein_coding Mus_musculus 0 5389
ENSMUST00000146638 Pcnxl3-006 retained_intron Mus_musculus 0 2953
ENSMUST00000145270 Pcnxl3-005 protein_coding Mus_musculus 0 2080
ENSMUST00000135119 Pcnxl3-003 retained_intron Mus_musculus 0 1831
ENSMUST00000141577 Pcnxl3-007 protein_coding Mus_musculus 0 894
ENSMUST00000127876 Pcnxl3-008 protein_coding Mus_musculus 0 800
ENSMUST00000021567 Pcnx-201 protein_coding Mus_musculus 0 800
ENSMUST00000137313 Pcnxl3-010 protein_coding Mus_musculus 0 701
ENSMUST00000133136 Pcnxl3-013 nonsense_mediated_decay Mus_musculus 0 518
ENSMUST00000120589 Pcnxl2-003 retained_intron Mus_musculus 0 411
ENSMUST00000047239 Pcnxl2-002 protein_coding Mus_musculus 0 411
ENSMUST00000124905 Pcnxl3-012 retained_intron Mus_musculus 0 366
ENSMUST00000132420 Pcnxl3-011 retained_intron Mus_musculus 0 361
ENSMUST00000147161 Pcnxl3-009 retained_intron Mus_musculus 0 311
ENSMUST00000119305 Pcnxl2-004 retained_intron Mus_musculus 0 302
ENSDART00000126141 CABZ01092745.1-201 protein_coding Danio_rerio 0.000006 55

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