C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 1, s subcomponent 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068797 C1s2-001 ENSMUSG00000079343 10090 - 6:124624625-124636085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068797
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068797 0.299±0.17 0.048±0.00 0.230±0.02 0.108±0.00 0.214±0.14 0.012±0.00 0.111±0.02 0.014±0.00 0.038±0.01 0.027±0.02 0.214±0.12 0.085±0.07 0.169±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0006956 IEA complement activation
GO:0006958 IEA complement activation, classical pathway
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328916 C1S-003 protein_coding Homo_sapiens 0 1602
ENST00000360817 C1S-004 protein_coding Homo_sapiens 0 1602
ENST00000403949 C1S-007 protein_coding Homo_sapiens 0 516
ENST00000406697 C1S-001 protein_coding Homo_sapiens 0 1602
ENST00000413211 C1S-006 protein_coding Homo_sapiens 0 315
ENST00000423384 C1S-005 protein_coding Homo_sapiens 0 307
ENST00000443875 C1S-002 nonsense_mediated_decay Homo_sapiens 0 941
ENST00000488701 C1S-009 retained_intron Homo_sapiens 0 243
ENST00000543187 C1S-020 processed_transcript Homo_sapiens 0 243
ENST00000617865 C1S-201 protein_coding Homo_sapiens 0 538

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