C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 1, s subcomponent
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328916 C1S-003 ENSG00000182326 9606 + 12:7060515-7071032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000328916
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000328916 38.173±0.00 3.097±2.18 26.364±11.08 39.376±29.46 2.302±0.00 117.400±0.00 17.898±0.00 8.690±0.00 243.496±220.88 65.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001H CIL_00001H_0001 CGP 12:6988259-7092607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA:IDA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0006508 IEA proteolysis
GO:0006956 TAS complement activation
GO:0006958 TAS complement activation, classical pathway
GO:0042802 IPI identical protein binding
GO:0045087 TAS innate immune response
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162443 C1s1-002 protein_coding Mus_musculus 0 1613
ENSMUST00000068797 C1s2-001 protein_coding Mus_musculus 0 1602
ENSMUST00000160505 C1s1-001 protein_coding Mus_musculus 0 1574
ENSMUST00000159463 C1s1-004 protein_coding Mus_musculus 0 398

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