C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 1, s subcomponent
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443875 C1S-002 ENSG00000182326 9606 + 12:7061839-7071030 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443875
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443875 48.694±0.00 120.917±0.00 5.629±0.00 45.556±0.00 118.714±0.00 24.021±0.00 22.719±0.00 197.142±0.00 70.349±0.00 10.554±0.00 200.230±0.00 14.974±2.64 125.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001H CIL_00001H_0001 CGP 12:6988259-7092607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162443 C1s1-002 protein_coding Mus_musculus 0 946
ENSMUST00000160505 C1s1-001 protein_coding Mus_musculus 0 946
ENSMUST00000068797 C1s2-001 protein_coding Mus_musculus 0 941
ENSMUST00000159463 C1s1-004 protein_coding Mus_musculus 0 390

Loading