C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 49, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069005 Fam49a-201 ENSMUSG00000020589 10090 + 12:12262139-12376359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069005 3.923±0.40 2.563±0.74 3.837±0.45 10.141±4.21 2.223±0.28 1.514±0.17 1.384±0.14 1.014±0.25 0.439±0.11 5.161±0.23 0.458±0.10 1.683±1.15 2.087±1.14 0.126±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094N CIL_00094N_0002 VISTA 12:11879096-12479918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381323 FAM49A-001 protein_coding Homo_sapiens 0 1877
ENST00000406434 FAM49A-002 protein_coding Homo_sapiens 0 1291
ENST00000445605 FAM49A-003 protein_coding Homo_sapiens 0 411
ENST00000451689 FAM49A-004 protein_coding Homo_sapiens 0 388
ENST00000469507 FAM49A-005 retained_intron Homo_sapiens 0 311

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