C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesencephalic astrocyte-derived neurotrophic factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069036 Manf-002 ENSMUSG00000032575 10090 - 9:106888762-106891415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000069036
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000069036 28.109±4.38 41.110±0.00 36.453±6.71 5.651±0.89 111.950±69.24 215.813±170.44 96.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MV CIL_0005MV_0003 CGP 9:106838312-106891979

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002014 IDA vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000446668 MANF-003 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000470900 MANF-002 processed_transcript Homo_sapiens 0 780
ENST00000482262 MANF-004 retained_intron Homo_sapiens 0 488
ENST00000528157 MANF-001 protein_coding Homo_sapiens 0 763

Loading