C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zyxin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070635 Zyx-201 ENSMUSG00000029860 10090 + 6:42349828-42358392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070635
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070635 77.087±30.84 42.683±9.41 55.250±2.01 20.281±5.86 51.802±18.82 42.558±8.93 26.174±9.30 20.677±8.27 17.224±4.73 111.415±17.28 7.728±1.06 58.037±26.12 97.249±47.74 12.642±4.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Q CIL_00074Q_0002 CGP 6:42315312-42360146
CIL_00074P CIL_00074P_0002 CGP 6:42349828-42373268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005913 ISO cell-cell adherens junction
GO:0007160 IMP cell-matrix adhesion
GO:0007179 IMP transforming growth factor beta receptor signaling pathway
GO:0007229 IMP integrin-mediated signaling pathway
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322764 ZYX-001 protein_coding Homo_sapiens 0 1982
ENST00000354434 ZYX-006 protein_coding Homo_sapiens 0 1127
ENST00000392910 ZYX-007 protein_coding Homo_sapiens 0 1456
ENST00000446634 ZYX-003 protein_coding Homo_sapiens 0 425

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