C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box K1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072837 Foxk1-201 ENSMUSG00000056493 10090 + 5:142401497-142462014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072837
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072837 6.549±1.67 6.808±0.58 4.376±0.02 5.633±1.28 8.864±3.99 11.766±0.53 3.104±0.39 4.879±0.16 2.609±0.84 9.146±2.87 4.105±0.59 11.367±2.49 5.756±4.97 6.234±2.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MA CIL_0002MA_0002 CGP 5:141241490-142462014
CIL_0002MF CIL_0002MF_0002 CGP 5:142401497-142478715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0005730 IEA nucleolus
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0007517 IEA muscle organ development
GO:0030154 IEA cell differentiation
GO:0030308 IDA negative regulation of cell growth
GO:0043565 IDA sequence-specific DNA binding
GO:0045786 TAS negative regulation of cell cycle
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328914 FOXK1-001 protein_coding Homo_sapiens 0 2061
ENST00000335255 FOXK2-001 protein_coding Homo_sapiens 2e-31 143
ENST00000401897 AP5Z1-201 protein_coding Homo_sapiens 0 1365
ENST00000473637 FOXK2-002 nonsense_mediated_decay Homo_sapiens 1e-31 143
ENST00000496023 FOXK1-003 retained_intron Homo_sapiens 0 488
ENST00000527313 FOXK2-006 retained_intron Homo_sapiens 3e-32 143
ENST00000622867 FOXK2-201 protein_coding Homo_sapiens 1e-31 143

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