C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cingulin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072899 Cgnl1-201 ENSMUSG00000032232 10090 - 9:71626509-71771602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072899 8.950±3.01 2.218±1.06 3.230±0.66 1.797±0.76 3.595±0.80 2.634±0.21 3.128±0.36 30.971±2.31 3.582±2.43 11.147±0.53 0.691±0.16 6.155±4.85 19.592±8.51 2.384±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004P0 CIL_0004P0_0002 CGP 9:71504347-71771602
CIL_0004OZ CIL_0004OZ_0002 CGP 9:71626509-72111871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003774 IEA motor activity
GO:0005923 IDA tight junction
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0015629 IDA actin cytoskeleton
GO:0016459 IEA myosin complex
GO:0043296 IDA apical junction complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281282 CGNL1-001 protein_coding Homo_sapiens 0 3363

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