C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073490 Lct-001 ENSMUSG00000026354 10090 - 1:128284756-128328318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073490 0.023±0.02 0.022±0.01 0.050±0.00 0.132±0.11 0.026±0.01 0.032±0.02 0.011±0.00 0.017±0.00 0.045±0.05 0.022±0.00 0.008±0.00 0.125±0.06 0.058±0.02 0.100±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NN CIL_0003NN_0002 CGP 1:128243964-128328318
CIL_0006VU CIL_0006VU_0002 CGP 1:128284756-128359664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 IEA carbohydrate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264162 LCT-001 protein_coding Homo_sapiens 0 4460
ENST00000452974 LCT-002 nonsense_mediated_decay Homo_sapiens 0 2272

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