C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524928 SLC39A13-003 ENSG00000165915 9606 + 11:47410085-47416494 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLungOvaryTestisENST00000524928
Transcript ID Adipose Adrenal Breast Lung Ovary Testis
ENST00000524928 0.831±0.00 2.373±0.00 1.231±0.00 0.587±0.00 4.761±0.00 3.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LM CIL_0002LM_0002 CGP 11:47354860-47416501

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073575 Slc39a13-001 protein_coding Mus_musculus 0 867
ENSMUST00000111436 Slc39a13-012 protein_coding Mus_musculus 0 486
ENSMUST00000123685 Slc39a13-004 processed_transcript Mus_musculus 0 484
ENSMUST00000153367 Slc39a13-003 protein_coding Mus_musculus 0 470
ENSMUST00000150348 Slc39a13-006 processed_transcript Mus_musculus 0 398
ENSMUST00000142943 Slc39a13-011 processed_transcript Mus_musculus 0 385
ENSMUST00000079976 Slc39a13-002 protein_coding Mus_musculus 0 254
ENSMUST00000130252 Slc39a13-005 processed_transcript Mus_musculus 3e-33 148
ENSMUST00000149430 Slc39a13-007 processed_transcript Mus_musculus 6e-30 137
ENSMUST00000141328 Slc39a13-008 processed_transcript Mus_musculus 8e-19 100

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