C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GSG1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073935 Gsg1l-201 ENSMUSG00000046182 10090 - 7:125878419-126082411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073935 0.339±0.07 76.215±10.47 0.131±0.09 12.026±6.00 0.088±0.04 0.298±0.07 5.033±0.86 0.201±0.08 0.096±0.05 2.221±0.38 0.022±0.01 8.668±2.44 0.290±0.36 0.260±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FH CIL_0008FH_0002 VISTA 7:125464047-126065353
CIL_0005TR CIL_0005TR_0002 CGP 7:125707915-126082411
CIL_0005TQ CIL_0005TQ_0002 CGP 7:125878419-126200501

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0032279 IDA asymmetric synapse
GO:2000311 IEA regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395724 GSG1L-003 protein_coding Homo_sapiens 0 342
ENST00000447459 GSG1L-002 protein_coding Homo_sapiens 0 342

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