C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cystin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074163 Cys1-001 ENSMUSG00000062563 10090 - 12:24665838-24681813 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074163
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074163 0.355±0.02 4.890±0.09 0.588±0.00 0.184±0.00 0.449±0.14 6.960±2.55 0.437±0.22 1.568±0.32 0.414±0.00 0.561±0.02 0.308±0.28 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DF CIL_0007DF_0002 CGP 12:24651371-24681813
CIL_0007DI CIL_0007DI_0002 CGP 12:24665838-24714146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0005930 IDA axoneme
GO:0036064 IDA ciliary basal body
GO:0045121 IDA membrane raft
GO:0048839 IMP inner ear development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381813 CYS1-001 protein_coding Homo_sapiens 4e-34 150

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