C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S10, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074353 Rps10-ps1-201 ENSMUSG00000060438 10090 + 3:95622278-95622775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074353 0.323±0.13 0.210±0.03 0.325±0.16 0.177±0.04 0.388±0.25 1.193±0.93 0.152±0.07 0.293±0.20 0.261±0.31 0.136±0.04 0.171±0.03 0.854±0.85 0.178±0.10 0.936±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000028 IEA ribosomal small subunit assembly
GO:0003735 IEA structural constituent of ribosome
GO:0022627 IEA cytosolic small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326199 RPS10-001 protein_coding Homo_sapiens 0 651
ENST00000344700 RPS10-005 protein_coding Homo_sapiens 0.0000000004 69
ENST00000393266 RP11-212P7.1-001 processed_pseudogene Homo_sapiens 1e-28 130
ENST00000453641 RP11-65N13.6-001 processed_pseudogene Homo_sapiens 0 315
ENST00000464218 RPS10-004 processed_transcript Homo_sapiens 0 651
ENST00000467531 RPS10-003 processed_transcript Homo_sapiens 0 651
ENST00000467930 RP11-425L10.1-001 processed_pseudogene Homo_sapiens 0 640
ENST00000469528 GAPVD1-018 processed_transcript Homo_sapiens 1e-23 113
ENST00000471205 RP11-215P8.1-001 processed_pseudogene Homo_sapiens 0 496
ENST00000485426 RP11-435F17.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000494077 RPS10-002 processed_transcript Homo_sapiens 0 651
ENST00000495588 GAPVD1-004 processed_transcript Homo_sapiens 2e-24 115
ENST00000508621 RP11-366M4.17-001 processed_pseudogene Homo_sapiens 0 305
ENST00000586795 RPS10P27-001 processed_pseudogene Homo_sapiens 0 483
ENST00000621356 RPS10-201 protein_coding Homo_sapiens 0 651

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