C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467930 RP11-425L10.1-001 ENSG00000244313 9606 - 11:46428653-46429150 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverOvaryPlacentaTestisENST00000467930
Transcript ID Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000467930 0.382±0.34 0.265±0.00 0.162±0.00 0.176±0.00 0.559±0.53 0.379±0.25 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LK CIL_0002LK_0002 CGP 11:46385098-46594125

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 662
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 662
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 662
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000074353 Rps10-ps1-201 protein_coding Mus_musculus 0 640
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 593
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 531
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 531
ENSMUST00000120308 Rps10-ps4-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 364

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