C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: villin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074734 Vill-002 ENSMUSG00000038775 10090 + 9:119052802-119071326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000074734
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000074734 1.096±0.00 0.137±0.00 2.777±0.00 0.740±0.05 0.086±0.03 2.830±0.83 0.144±0.02 0.045±0.00 1.519±0.19 0.585±0.00 0.845±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005AN CIL_0005AN_0002 CGP 9:118926453-119071525
CIL_0005A4 CIL_0005A4_0002 CGP 9:119052778-119093496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005575 ND cellular_component
GO:0007010 IEA cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283713 VILL-001 protein_coding Homo_sapiens 0 1472
ENST00000383759 VILL-201 protein_coding Homo_sapiens 0 1472
ENST00000412008 VILL-009 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000463080 VILL-010 retained_intron Homo_sapiens 0 599
ENST00000465644 VILL-002 protein_coding Homo_sapiens 0 780
ENST00000484717 VILL-004 retained_intron Homo_sapiens 0 1011
ENST00000492491 VILL-007 protein_coding Homo_sapiens 0 401

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