C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 105kDa/110kDa protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074846 Hsph1-001 ENSMUSG00000029657 10090 - 5:149616544-149636338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074846
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074846 5.577±2.18 2.897±1.08 10.990±1.44 26.480±2.78 2.707±0.27 2.453±0.87 5.591±0.33 12.157±2.31 9.741±7.27 2.833±0.27 10.363±1.14 8.744±5.80 30.556±11.29 4.273±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004GB CIL_0004GB_0002 CGP 5:149528679-149636376
CIL_0000PA CIL_0000PA_0003 CGP 5:149614287-149762599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005874 IDA microtubule
GO:0006986 TAS response to unfolded protein
GO:0043014 IDA alpha-tubulin binding
GO:0043524 TAS negative regulation of neuron apoptotic process
GO:0045345 TAS positive regulation of MHC class I biosynthetic process
GO:0051085 IDA chaperone mediated protein folding requiring cofactor
GO:0051135 TAS positive regulation of NK T cell activation
GO:0070062 IEA extracellular vesicular exosome
GO:0070507 NAS regulation of microtubule cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320027 HSPH1-001 protein_coding Homo_sapiens 0 3013
ENST00000380405 HSPH1-002 protein_coding Homo_sapiens 0 1783
ENST00000435381 HSPH1-004 protein_coding Homo_sapiens 0 342
ENST00000445273 HSPH1-201 protein_coding Homo_sapiens 0 2200
ENST00000602786 HSPH1-003 nonsense_mediated_decay Homo_sapiens 0 2409

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