C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heat shock 105kDa/110kDa protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029657 Hsph1 10090 - 5:149614287-149636376 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074846 Hsph1-001 149616544-149636338 protein_coding
  ENSMUST00000076410 Hsph1-006 149614287-149636171 protein_coding
  ENSMUST00000110498 Hsph1-002 149617169-149636338 protein_coding
  ENSMUST00000127977 Hsph1-004 149632039-149636351 protein_coding
  ENSMUST00000132412 Hsph1-005 149629984-149636376 protein_coding
  ENSMUST00000137534 Hsph1-003 149620682-149636338 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074846ENSMUST00000076410ENSMUST00000110498ENSMUST00000127977ENSMUST00000137534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074846 5.577±2.18 2.897±1.08 10.990±1.44 26.480±2.78 2.707±0.27 2.453±0.87 5.591±0.33 12.157±2.31 9.741±7.27 2.833±0.27 10.363±1.14 8.744±5.80 30.556±11.29 4.273±1.22
ENSMUST00000076410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.882±0.00
ENSMUST00000110498 2.721±1.80 5.656±1.47 2.840±0.24 4.391±0.00 1.381±0.35 2.942±1.56 N/A 4.112±0.00 3.336±1.71 1.728±0.15 2.465±0.52 12.589±5.80 12.097±8.14 2.618±1.07
ENSMUST00000127977 N/A 12.085±4.66 N/A N/A 6.763±1.83 N/A N/A N/A N/A 4.156±0.00 N/A 18.653±2.85 N/A N/A
ENSMUST00000137534 1.841±0.04 2.696±0.77 N/A N/A 0.972±0.21 0.858±0.11 N/A 1.537±0.03 1.097±0.10 1.103±0.50 N/A 4.277±0.81 N/A 1.073±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004GB CIL_0004GB_0002 CGP 5:149528679-149636376
CIL_0000PA CIL_0000PA_0003 CGP 5:149614287-149762599

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005874 IDA microtubule
GO:0006986 TAS response to unfolded protein
GO:0043014 IDA alpha-tubulin binding
GO:0043524 TAS negative regulation of neuron apoptotic process
GO:0045345 TAS positive regulation of MHC class I biosynthetic process
GO:0051085 IDA chaperone mediated protein folding requiring cofactor
GO:0051135 TAS positive regulation of NK T cell activation
GO:0070062 IEA extracellular vesicular exosome
GO:0070507 NAS regulation of microtubule cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019874 hsph1 heat shock 105/110 protein 1 protein_coding Danio_rerio
ENSG00000120694 HSPH1 heat shock 105kDa/110kDa protein 1 protein_coding Homo_sapiens

Loading