C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004GB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054572-ENSDARG00000019874 CGP 7955 15:30823777-30885714
GeneTranscriptPositionBiotype
ENSDARG00000019874 (hsph1)
heat shock 105/110 protein 1 		ENSDART00000005120 (hsph1-201) 30862449-30885432 protein_coding
ENSDART00000153598 (hsph1-001) 30861689-30885714 protein_coding
ENSDART00000155806 (hsph1-002) 30882950-30885541 retained_intron
ENSDARG00000054572 (si:dkey-1m11.8)
WD repeat domain 49 		ENSDART00000076793 (si:dkey-1m11.8-201) 30833199-30859752 protein_coding
ENSDART00000154456 (si:dkey-1m11.8-001) 30823777-30860512 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004GB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029658-ENSMUSG00000029657 CGP 10090 5:149528679-149636376
GeneTranscriptPositionBiotype
ENSMUSG00000029657 (Hsph1)
heat shock 105kDa/110kDa protein 1 		ENSMUST00000074846 (Hsph1-001) 149616544-149636338 protein_coding
ENSMUST00000076410 (Hsph1-006) 149614287-149636171 protein_coding
ENSMUST00000110498 (Hsph1-002) 149617169-149636338 protein_coding
ENSMUST00000127977 (Hsph1-004) 149632039-149636351 protein_coding
ENSMUST00000132412 (Hsph1-005) 149629984-149636376 protein_coding
ENSMUST00000137534 (Hsph1-003) 149620682-149636338 retained_intron
ENSMUSG00000029658 (Wdr95)
WD40 repeat domain 95 		ENSMUST00000110502 (Wdr95-001) 149528679-149611894 protein_coding
ENSMUST00000121108 (Wdr95-007) 149529733-149611894 protein_coding
ENSMUST00000123352 (Wdr95-005) 149529733-149564539 retained_intron
ENSMUST00000125103 (Wdr95-002) 149529691-149599907 nonsense_mediated_decay
ENSMUST00000130653 (Wdr95-004) 149536607-149563438 retained_intron
ENSMUST00000138690 (Wdr95-006) 149581778-149588216 retained_intron
ENSMUST00000152090 (Wdr95-003) 149529685-149563438 retained_intron
ENSMUSG00000086744 (Gm15997)
predicted gene 15997 		ENSMUST00000156774 (Gm15997-001) 149489056-149538030 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GB_0001ENSDARG00000019874ENSDART00000005120ENSDART00000153598ENSDART00000155806ENSDARG00000054572ENSDART00000076793ENSDART00000154456CIL_0004GB_0002ENSMUSG00000029657ENSMUST00000074846ENSMUST00000076410ENSMUST00000110498ENSMUST00000127977ENSMUST00000132412ENSMUST00000137534ENSMUSG00000029658ENSMUST00000110502ENSMUST00000121108ENSMUST00000123352ENSMUST00000125103ENSMUST00000130653ENSMUST00000138690ENSMUST00000152090ENSMUSG00000086744ENSMUST00000156774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GB_0001ENSDARG00000019874ENSDART00000005120ENSDART00000153598ENSDART00000155806ENSDARG00000054572ENSDART00000076793ENSDART00000154456CIL_0004GB_0002ENSMUSG00000029657ENSMUST00000074846ENSMUST00000076410ENSMUST00000110498ENSMUST00000127977ENSMUST00000137534ENSMUSG00000029658ENSMUST00000110502ENSMUST00000121108ENSMUST00000125103ENSMUST00000138690ENSMUST00000152090ENSMUSG00000086744ENSMUST00000156774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019874 ENSDART00000005120 N/A N/A N/A N/A N/A N/A 0.991±0.00 N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENSDART00000153598 N/A N/A N/A 2.700±0.00 N/A N/A 2.457±1.24 0.632±0.45 0.051±0.00 N/A 1.905±0.00 N/A N/A N/A
ENSDART00000155806 N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A
ENSDARG00000054572 ENSDART00000076793 N/A N/A N/A 0.085±0.00 N/A N/A 0.041±0.00 N/A 0.032±0.00 N/A N/A N/A N/A N/A
ENSDART00000154456 N/A N/A N/A 0.118±0.07 N/A N/A 0.031±0.00 1.195±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029657 ENSMUST00000074846 5.577±2.18 2.897±1.08 10.990±1.44 26.480±2.78 2.707±0.27 2.453±0.87 5.591±0.33 12.157±2.31 9.741±7.27 2.833±0.27 10.363±1.14 8.744±5.80 30.556±11.29 4.273±1.22
ENSMUST00000076410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.882±0.00
ENSMUST00000110498 2.721±1.80 5.656±1.47 2.840±0.24 4.391±0.00 1.381±0.35 2.942±1.56 N/A 4.112±0.00 3.336±1.71 1.728±0.15 2.465±0.52 12.589±5.80 12.097±8.14 2.618±1.07
ENSMUST00000127977 N/A 12.085±4.66 N/A N/A 6.763±1.83 N/A N/A N/A N/A 4.156±0.00 N/A 18.653±2.85 N/A N/A
ENSMUST00000132412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137534 1.841±0.04 2.696±0.77 N/A N/A 0.972±0.21 0.858±0.11 N/A 1.537±0.03 1.097±0.10 1.103±0.50 N/A 4.277±0.81 N/A 1.073±0.20
ENSMUSG00000029658 ENSMUST00000110502 0.068±0.02 N/A 0.034±0.00 N/A 0.150±0.05 N/A 0.143±0.01 0.029±0.01 0.009±0.00 N/A 0.039±0.00 0.782±0.05 0.010±0.01 0.413±0.05
ENSMUST00000121108 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A 0.397±0.26 N/A 0.936±0.18 N/A 0.241±0.00
ENSMUST00000123352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125103 N/A 0.059±0.00 N/A N/A 0.040±0.00 0.025±0.00 0.038±0.00 0.019±0.01 0.014±0.00 N/A 0.020±0.00 0.293±0.00 0.016±0.00 N/A
ENSMUST00000130653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.01 N/A N/A N/A
ENSMUST00000152090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A 8.054±2.42
ENSMUSG00000086744 ENSMUST00000156774 N/A N/A 0.029±0.02 0.055±0.00 N/A N/A 0.019±0.00 N/A N/A 0.035±0.02 N/A 0.131±0.05 N/A 0.022±0.00

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