C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498812 PTPLA-004 ENSG00000165996 9606 - 10:17590275-17603744 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000498812
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000498812 1.222±0.00 2.522±0.00 0.582±0.00 1.169±0.00 3.304±0.00 22.806±0.00 0.935±0.00 0.466±0.00 3.044±0.00 3.248±1.48 1.438±0.33 1.077±0.47 2.464±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AP CIL_0005AP_0001 CGP 10:17318383-17617377
CIL_0006BI CIL_0006BI_0001 CGP 10:17589032-17715914

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091429 Ptpla-003 protein_coding Mus_musculus 0 501
ENSMUST00000131730 Ptpla-002 processed_transcript Mus_musculus 0 433
ENSMUST00000118946 Gm11451-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000074854 Ptpla-201 protein_coding Mus_musculus 1e-33 147
ENSMUST00000114753 Ptpla-001 protein_coding Mus_musculus 1e-33 147

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