C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5161
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075243 Gm5161-001 ENSMUSG00000061486 10090 - 9:101448501-101449353 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverMusclePlacentaENSMUST00000075243
Transcript ID Adipose Bladder Breast Heart Liver Muscle Placenta
ENSMUST00000075243 0.030±0.00 0.051±0.00 0.093±0.00 0.272±0.00 0.014±0.00 0.071±0.00 0.062±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243563 SNRPA-001 protein_coding Homo_sapiens 0 944
ENST00000597353 SNRPA-011 protein_coding Homo_sapiens 0 501
ENST00000598452 SNRPA-004 retained_intron Homo_sapiens 0 372
ENST00000598923 SNRPA-010 retained_intron Homo_sapiens 0 630
ENST00000599362 SNRPA-009 protein_coding Homo_sapiens 0 479
ENST00000600456 SNRPA-005 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000601253 SNRPA-008 protein_coding Homo_sapiens 0 412
ENST00000601393 SNRPA-006 protein_coding Homo_sapiens 0 263
ENST00000601545 SNRPA-003 protein_coding Homo_sapiens 0 671

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